LOCUS       NM_001000619             930 bp    mRNA    linear   ROD 24-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 4 subfamily C member
            127 (Or4c127), mRNA.
ACCESSION   NM_001000619
VERSION     NM_001000619.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 930)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 930)
  AUTHORS   Gibbs,R.A., Weinstock,G.M., Metzker,M.L., Muzny,D.M.,
            Sodergren,E.J., Scherer,S., Scott,G., Steffen,D., Worley,K.C.,
            Burch,P.E., Okwuonu,G., Hines,S., Lewis,L., DeRamo,C., Delgado,O.,
            Dugan-Rocha,S., Miner,G., Morgan,M., Hawes,A., Gill,R., Celera,
            Holt,R.A., Adams,M.D., Amanatides,P.G., Baden-Tillson,H.,
            Barnstead,M., Chin,S., Evans,C.A., Ferriera,S., Fosler,C.,
            Glodek,A., Gu,Z., Jennings,D., Kraft,C.L., Nguyen,T.,
            Pfannkoch,C.M., Sitter,C., Sutton,G.G., Venter,J.C., Woodage,T.,
            Smith,D., Lee,H.M., Gustafson,E., Cahill,P., Kana,A.,
            Doucette-Stamm,L., Weinstock,K., Fechtel,K., Weiss,R.B., Dunn,D.M.,
            Green,E.D., Blakesley,R.W., Bouffard,G.G., De Jong,P.J.,
            Osoegawa,K., Zhu,B., Marra,M., Schein,J., Bosdet,I., Fjell,C.,
            Jones,S., Krzywinski,M., Mathewson,C., Siddiqui,A., Wye,N.,
            McPherson,J., Zhao,S., Fraser,C.M., Shetty,J., Shatsman,S.,
            Geer,K., Chen,Y., Abramzon,S., Nierman,W.C., Havlak,P.H., Chen,R.,
            Durbin,K.J., Simons,R., Ren,Y., Song,X.Z., Li,B., Liu,Y., Qin,X.,
            Cawley,S., Worley,K.C., Cooney,A.J., D'Souza,L.M., Martin,K.,
            Wu,J.Q., Gonzalez-Garay,M.L., Jackson,A.R., Kalafus,K.J.,
            McLeod,M.P., Milosavljevic,A., Virk,D., Volkov,A., Wheeler,D.A.,
            Zhang,Z., Bailey,J.A., Eichler,E.E., Tuzun,E., Birney,E.,
            Mongin,E., Ureta-Vidal,A., Woodwark,C., Zdobnov,E., Bork,P.,
            Suyama,M., Torrents,D., Alexandersson,M., Trask,B.J., Young,J.M.,
            Huang,H., Wang,H., Xing,H., Daniels,S., Gietzen,D., Schmidt,J.,
            Stevens,K., Vitt,U., Wingrove,J., Camara,F., Mar Alba,M.,
            Abril,J.F., Guigo,R., Smit,A., Dubchak,I., Rubin,E.M., Couronne,O.,
            Poliakov,A., Hubner,N., Ganten,D., Goesele,C., Hummel,O.,
            Kreitler,T., Lee,Y.A., Monti,J., Schulz,H., Zimdahl,H.,
            Himmelbauer,H., Lehrach,H., Jacob,H.J., Bromberg,S.,
            Gullings-Handley,J., Jensen-Seaman,M.I., Kwitek,A.E., Lazar,J.,
            Pasko,D., Tonellato,P.J., Twigger,S., Ponting,C.P., Duarte,J.M.,
            Rice,S., Goodstadt,L., Beatson,S.A., Emes,R.D., Winter,E.E.,
            Webber,C., Brandt,P., Nyakatura,G., Adetobi,M., Chiaromonte,F.,
            Elnitski,L., Eswara,P., Hardison,R.C., Hou,M., Kolbe,D., Makova,K.,
            Miller,W., Nekrutenko,A., Riemer,C., Schwartz,S., Taylor,J.,
            Yang,S., Zhang,Y., Lindpaintner,K., Andrews,T.D., Caccamo,M.,
            Clamp,M., Clarke,L., Curwen,V., Durbin,R., Eyras,E., Searle,S.M.,
            Cooper,G.M., Batzoglou,S., Brudno,M., Sidow,A., Stone,E.A.,
            Venter,J.C., Payseur,B.A., Bourque,G., Lopez-Otin,C., Puente,X.S.,
            Chakrabarti,K., Chatterji,S., Dewey,C., Pachter,L., Bray,N.,
            Yap,V.B., Caspi,A., Tesler,G., Pevzner,P.A., Haussler,D.,
            Roskin,K.M., Baertsch,R., Clawson,H., Furey,T.S., Hinrichs,A.S.,
            Karolchik,D., Kent,W.J., Rosenbloom,K.R., Trumbower,H.,
            Weirauch,M., Cooper,D.N., Stenson,P.D., Ma,B., Brent,M.,
            Arumugam,M., Shteynberg,D., Copley,R.R., Taylor,M.S., Riethman,H.,
            Mudunuri,U., Peterson,J., Guyer,M., Felsenfeld,A., Old,S.,
            Mockrin,S. and Collins,F.
  CONSRTM   Rat Genome Sequencing Project Consortium
  TITLE     Genome sequence of the Brown Norway rat yields insights into
            mammalian evolution
  JOURNAL   Nature 428 (6982), 493-521 (2004)
   PUBMED   15057822
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000003.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-930               JAXUCZ010000003.1  96475701-96476630
FEATURES             Location/Qualifiers
     source          1..930
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q24"
     gene            1..930
                     /gene="Or4c127"
                     /gene_synonym="Olr727"
                     /note="olfactory receptor family 4 subfamily C member 127"
                     /db_xref="GeneID:404811"
                     /db_xref="RGD:1333254"
     CDS             1..930
                     /gene="Or4c127"
                     /gene_synonym="Olr727"
                     /note="olfactory receptor gene Olr727; olfactory receptor
                     727"
                     /codon_start=1
                     /product="olfactory receptor Olr727"
                     /protein_id="NP_001000619.1"
                     /db_xref="GeneID:404811"
                     /db_xref="RGD:1333254"
                     /translation="MQKKMSNVTEFILLGLTQDPDLQKLLFIVCLIIYLITLAGNMLI
                     SVTIFISPALATPMYFFLSYLSIIDGFYSSSIAPKMIYDLISEKSTISFNGCMTQLFA
                     EHFFAAAEIILLISMAYDRYVAICKPLHYMTIMNRHVCIFLVVAAGIVGFVHGMIQTI
                     FIAQLPFCGPNTINHFICDLIPLLELACTDTHTLGPLIAANSGSMCLLIFSMLVASYV
                     FILRSLRNHSSEGRRKALSTCASHVTVVVLFFVPCSYLYVRPMISFHIDKVVSVFYTL
                     VTPLLNPLIYTLRNEEVKNVMKKLLGQIRSNIC"
     exon            1..930
                     /gene="Or4c127"
                     /gene_synonym="Olr727"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgcaaaaaa aaatgagcaa tgtcacagaa ttcatcctcc tgggcttgac ccaagaccca
       61 gacctgcaga aacttttatt cattgtgtgc ttaataatct acttgatcac actggcaggt
      121 aacatgctca tctcagtcac catcttcatc agtccagccc tggctactcc catgtacttc
      181 tttttgtcct acttgtccat catagatggt ttctactctt cttccatagc acccaaaatg
      241 atctatgact taatctctga gaagagcacc atatccttca atggctgcat gacacagctt
      301 tttgctgagc atttttttgc tgcagctgaa atcatcttgc tgatttccat ggcctatgat
      361 cgttatgtag ccatctgcaa gcccttgcac tacatgacta tcatgaaccg acatgtatgt
      421 atcttcttgg tggtagcagc tggaattgtg gggtttgttc atggaatgat acagactata
      481 tttatagccc aattaccctt ctgcgggccc aataccatta atcactttat atgtgattta
      541 ataccacttc tggagttggc ctgcactgac actcatactc tggggcccct gatcgctgcc
      601 aacagtgggt caatgtgttt actcattttc tctatgctgg ttgcttccta tgtgtttatt
      661 cttcgctccc tgaggaatca cagttcagaa gggcgtcgca aagctctgtc tacctgtgcc
      721 tctcatgtca ctgttgttgt cttgttcttt gtcccttgct catacttgta tgtgagacca
      781 atgatctcct tccacattga caaagttgtg agtgtgtttt acacactggt gacacctctg
      841 ttgaaccctt taatctatac cctcagaaat gaggaggtca aaaatgttat gaagaagctc
      901 ctgggtcaaa taaggtcaaa tatttgttaa
//
