LOCUS       NM_001000353             936 bp    mRNA    linear   ROD 26-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 4 subfamily C member
            116 (Or4c116), mRNA.
ACCESSION   NM_001000353 XM_230234
VERSION     NM_001000353.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 936)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000003.1.
            
            On Aug 30, 2004 this sequence version replaced XM_230234.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-936               JAXUCZ010000003.1  95515964-95516899   c
FEATURES             Location/Qualifiers
     source          1..936
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q24"
     gene            1..936
                     /gene="Or4c116"
                     /gene_synonym="Olr678; ratchr3-73313679-73312744_ORF"
                     /note="olfactory receptor family 4 subfamily C member 116"
                     /db_xref="GeneID:295884"
                     /db_xref="RGD:1333756"
     CDS             1..936
                     /gene="Or4c116"
                     /gene_synonym="Olr678; ratchr3-73313679-73312744_ORF"
                     /note="ratchr3- 73313679-73312744_ORF; olfactory receptor
                     gene Olr678; olfactory receptor 678"
                     /codon_start=1
                     /product="olfactory receptor Olr678"
                     /protein_id="NP_001000353.1"
                     /db_xref="GeneID:295884"
                     /db_xref="RGD:1333756"
                     /translation="MQNQSLVSEFILLGLSQNTKVEKILFLLFLLIYLATIGGNMIIV
                     ATIIYSPALLGSPMYFFLVFLSLLDACTSTVVTPKMIIGFFYEMKTISFEGCMTQLFA
                     IHFFTAVEVIVLSAMAYDRYVAICKPLHYSSIMSRRLCGVLVGIAWFGGLLHSIIQII
                     FTLQLPFCGPNVIDHYMCDLFPLLKLACTDTHIFVILVFANSGSICIIIFSLLLVSYG
                     VILFSLRTHSSEGRHKALSTCGSHITVVVLFFVPCILIYARPSSAFSFEKNTLIFANI
                     LTPLLNPMVYTFRNKEMKNAIRKMWKRLIVVSDKQ"
     exon            1..936
                     /gene="Or4c116"
                     /gene_synonym="Olr678; ratchr3-73313679-73312744_ORF"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgcaaaatc aaagccttgt cagtgagttc atactcctgg gtctttctca gaacacaaaa
       61 gttgagaaaa tattgtttct tctatttttg ttgatctacc ttgcaactat tggtggcaat
      121 atgataattg tggcgaccat catctacagc cctgcattgc ttggttcccc catgtacttc
      181 tttttggtat tcttgtcctt actggatgca tgcacttcta ctgttgtaac accgaagatg
      241 atcataggct tcttctatga aatgaagacc atctcctttg aaggctgcat gacccaactg
      301 tttgccatac acttctttac tgcagtcgag gtgattgtcc tgtcagccat ggcctatgac
      361 cgctatgtgg ccatttgcaa gcccttgcac tactcttcca ttatgagcag gaggctctgt
      421 ggtgttttgg taggcatagc atggtttggg ggattattgc attctatcat acaaatcata
      481 tttaccttgc agttaccttt ctgtggaccc aatgttattg atcactatat gtgtgacttg
      541 ttcccattat tgaagcttgc ctgcactgac acacacattt ttgttatttt agtgtttgcc
      601 aacagtggtt ctatctgcat cattatcttc tccttgctgc ttgtctccta tggggtcatc
      661 ttgttctctt tgagaaccca cagttctgaa ggtcgacata aagctctctc cacctgtgga
      721 tcccatatta cagttgttgt tctattcttt gttccatgca tattaatata tgcacggcct
      781 tcatctgcat tctcctttga aaaaaacaca cttatatttg ccaatatcct gacaccattg
      841 ctcaatccta tggtttacac attcaggaat aaggaaatga agaacgcaat caggaaaatg
      901 tggaagagat tgatagtcgt ttcagataag cagtaa
//
