LOCUS       NM_001000350             915 bp    mRNA    linear   ROD 26-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 4 subfamily C member
            112 (Or4c112), mRNA.
ACCESSION   NM_001000350 XM_230228
VERSION     NM_001000350.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 915)
  AUTHORS   Gibbs,R.A., Weinstock,G.M., Metzker,M.L., Muzny,D.M.,
            Sodergren,E.J., Scherer,S., Scott,G., Steffen,D., Worley,K.C.,
            Burch,P.E., Okwuonu,G., Hines,S., Lewis,L., DeRamo,C., Delgado,O.,
            Dugan-Rocha,S., Miner,G., Morgan,M., Hawes,A., Gill,R., Celera,
            Holt,R.A., Adams,M.D., Amanatides,P.G., Baden-Tillson,H.,
            Barnstead,M., Chin,S., Evans,C.A., Ferriera,S., Fosler,C.,
            Glodek,A., Gu,Z., Jennings,D., Kraft,C.L., Nguyen,T.,
            Pfannkoch,C.M., Sitter,C., Sutton,G.G., Venter,J.C., Woodage,T.,
            Smith,D., Lee,H.M., Gustafson,E., Cahill,P., Kana,A.,
            Doucette-Stamm,L., Weinstock,K., Fechtel,K., Weiss,R.B., Dunn,D.M.,
            Green,E.D., Blakesley,R.W., Bouffard,G.G., De Jong,P.J.,
            Osoegawa,K., Zhu,B., Marra,M., Schein,J., Bosdet,I., Fjell,C.,
            Jones,S., Krzywinski,M., Mathewson,C., Siddiqui,A., Wye,N.,
            McPherson,J., Zhao,S., Fraser,C.M., Shetty,J., Shatsman,S.,
            Geer,K., Chen,Y., Abramzon,S., Nierman,W.C., Havlak,P.H., Chen,R.,
            Durbin,K.J., Simons,R., Ren,Y., Song,X.Z., Li,B., Liu,Y., Qin,X.,
            Cawley,S., Worley,K.C., Cooney,A.J., D'Souza,L.M., Martin,K.,
            Wu,J.Q., Gonzalez-Garay,M.L., Jackson,A.R., Kalafus,K.J.,
            McLeod,M.P., Milosavljevic,A., Virk,D., Volkov,A., Wheeler,D.A.,
            Zhang,Z., Bailey,J.A., Eichler,E.E., Tuzun,E., Birney,E.,
            Mongin,E., Ureta-Vidal,A., Woodwark,C., Zdobnov,E., Bork,P.,
            Suyama,M., Torrents,D., Alexandersson,M., Trask,B.J., Young,J.M.,
            Huang,H., Wang,H., Xing,H., Daniels,S., Gietzen,D., Schmidt,J.,
            Stevens,K., Vitt,U., Wingrove,J., Camara,F., Mar Alba,M.,
            Abril,J.F., Guigo,R., Smit,A., Dubchak,I., Rubin,E.M., Couronne,O.,
            Poliakov,A., Hubner,N., Ganten,D., Goesele,C., Hummel,O.,
            Kreitler,T., Lee,Y.A., Monti,J., Schulz,H., Zimdahl,H.,
            Himmelbauer,H., Lehrach,H., Jacob,H.J., Bromberg,S.,
            Gullings-Handley,J., Jensen-Seaman,M.I., Kwitek,A.E., Lazar,J.,
            Pasko,D., Tonellato,P.J., Twigger,S., Ponting,C.P., Duarte,J.M.,
            Rice,S., Goodstadt,L., Beatson,S.A., Emes,R.D., Winter,E.E.,
            Webber,C., Brandt,P., Nyakatura,G., Adetobi,M., Chiaromonte,F.,
            Elnitski,L., Eswara,P., Hardison,R.C., Hou,M., Kolbe,D., Makova,K.,
            Miller,W., Nekrutenko,A., Riemer,C., Schwartz,S., Taylor,J.,
            Yang,S., Zhang,Y., Lindpaintner,K., Andrews,T.D., Caccamo,M.,
            Clamp,M., Clarke,L., Curwen,V., Durbin,R., Eyras,E., Searle,S.M.,
            Cooper,G.M., Batzoglou,S., Brudno,M., Sidow,A., Stone,E.A.,
            Venter,J.C., Payseur,B.A., Bourque,G., Lopez-Otin,C., Puente,X.S.,
            Chakrabarti,K., Chatterji,S., Dewey,C., Pachter,L., Bray,N.,
            Yap,V.B., Caspi,A., Tesler,G., Pevzner,P.A., Haussler,D.,
            Roskin,K.M., Baertsch,R., Clawson,H., Furey,T.S., Hinrichs,A.S.,
            Karolchik,D., Kent,W.J., Rosenbloom,K.R., Trumbower,H.,
            Weirauch,M., Cooper,D.N., Stenson,P.D., Ma,B., Brent,M.,
            Arumugam,M., Shteynberg,D., Copley,R.R., Taylor,M.S., Riethman,H.,
            Mudunuri,U., Peterson,J., Guyer,M., Felsenfeld,A., Old,S.,
            Mockrin,S. and Collins,F.
  CONSRTM   Rat Genome Sequencing Project Consortium
  TITLE     Genome sequence of the Brown Norway rat yields insights into
            mammalian evolution
  JOURNAL   Nature 428 (6982), 493-521 (2004)
   PUBMED   15057822
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000003.1.
            
            On Aug 30, 2004 this sequence version replaced XM_230228.2.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-915               JAXUCZ010000003.1  95345865-95346779   c
FEATURES             Location/Qualifiers
     source          1..915
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q24"
     gene            1..915
                     /gene="Or4c112"
                     /gene_synonym="Olr672; ratchr3-73130621-73129707_ORF"
                     /note="olfactory receptor family 4 subfamily C member 112"
                     /db_xref="GeneID:295878"
                     /db_xref="RGD:1333913"
     CDS             1..915
                     /gene="Or4c112"
                     /gene_synonym="Olr672; ratchr3-73130621-73129707_ORF"
                     /note="olfactory receptor gene Olr672; olfactory receptor
                     672"
                     /codon_start=1
                     /product="olfactory receptor Olr672"
                     /protein_id="NP_001000350.1"
                     /db_xref="GeneID:295878"
                     /db_xref="RGD:1333913"
                     /translation="MQNQSFVTEFILLGLSQNLNVEKMLFVLFLFIYLATIGGNMIIV
                     ITIMYSPTLLGSPMYFFLAFLSFLDACTSSTVTPKIIIDCFYERKIMSFDCCMIQLFA
                     VHFFTGAEVIVLASMAYDRYVAICKPLHYSSIMTQRLCEVLVVVSWAGGFLHSIIQII
                     FTLQLPLCGPNVIDHYMCDLFPLLKLACTDTHIFVFLIFANSGAICIIIFSLLLVSYG
                     VILFSLRAHSSEGRRKALSTCGSHIIVVLLFFVPCILIYARPTSAFSFEKNMLIFVNV
                     LTPLLNPMVYTFRNKEMINAIRKMWKRL"
     exon            1..915
                     /gene="Or4c112"
                     /gene_synonym="Olr672; ratchr3-73130621-73129707_ORF"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgcaaaacc aaagctttgt cactgagttt atactactcg gactttcaca gaacctgaat
       61 gtggagaaaa tgctatttgt tttgttttta tttatctatc ttgcaactat tgggggcaac
      121 atgataattg tgattaccat catgtacagt cctacactgt tgggctcccc catgtacttc
      181 ttcttggcct tcctgtcctt tctggatgct tgcacttctt ctactgtcac ccccaagata
      241 attatagact gtttctatga gagaaagatc atgtcctttg actgttgtat gatacaactg
      301 tttgctgtcc acttcttcac tggggcagaa gtgattgtcc tggcatccat ggcctatgac
      361 cggtatgtgg ctatttgcaa gcccctgcac tactcttcca tcatgaccca gaggctctgt
      421 gaagttttag ttgtggtatc ctgggcagga ggtttcttgc attctatcat acaaattatc
      481 ttcactttgc agctgccttt atgtggacca aatgtcattg atcattacat gtgtgacttg
      541 ttcccattac tgaagcttgc ctgcactgac acacacatat ttgtcttttt aatatttgcc
      601 aacagtggtg ctatatgcat tataatcttc tctttattgc ttgtctccta tggtgtcatc
      661 ttgttttctc tgagagccca cagctctgaa ggtcgacgta aagctctctc tacctgtgga
      721 tcccatataa ttgtcgtgct tttgtttttt gttccatgca tattgatata tgcaagaccc
      781 acttctgcat tctcctttga gaaaaacatg cttatatttg tcaatgtcct gacaccactg
      841 ctcaatccta tggtttacac attcaggaat aaggaaatga taaatgccat cagaaaaatg
      901 tggaaaagat tgtag
//
