LOCUS       NM_001000923             954 bp    mRNA    linear   ROD 26-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 4 subfamily A member 80
            (Or4a80), mRNA.
ACCESSION   NM_001000923
VERSION     NM_001000923.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 954)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000003.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-954               JAXUCZ010000003.1  96186018-96186971   c
FEATURES             Location/Qualifiers
     source          1..954
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q24"
     gene            1..954
                     /gene="Or4a80"
                     /gene_synonym="Olr714"
                     /note="olfactory receptor family 4 subfamily A member 80"
                     /db_xref="GeneID:405239"
                     /db_xref="RGD:1333089"
     CDS             1..954
                     /gene="Or4a80"
                     /gene_synonym="Olr714"
                     /note="olfactory receptor 714; olfactory receptor gene
                     Olr714"
                     /codon_start=1
                     /product="olfactory receptor Olr714"
                     /protein_id="NP_001000923.1"
                     /db_xref="GeneID:405239"
                     /db_xref="RGD:1333089"
                     /translation="MGQSKIVTEFVLLGFTQDPAGQKALFVMFSLMYIATMVGNLLIV
                     GTVIVSPSLGSPMYFFLASLSLMDAVYSTAISPKLIVDLLREKKTISFRACISQLFIE
                     HLFGGVDIVILVAMAYDCYVAICKPLHYLIIMNRRVCILFLVMAWAGGFAHALFQVLA
                     VYNLPFCGPNIIDHFGCDIYPLLLLACTDTYLIGLTIIANGGAMCIVIFILLLLSYAI
                     ILRSLQNHSQEGRHKALSTCSSHITVFFLFFVPCILMYVRPVSSFPIDKSITVIYTVV
                     TPVLNPLIYTLRNSEMKNSMEKLLQKILSPNRLRLLCCLYY"
     exon            1..954
                     /gene="Or4a80"
                     /gene_synonym="Olr714"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgggccaga gcaaaattgt cacagaattt gtcctgctgg gcttcactca ggatcctgct
       61 gggcaaaaag ctttatttgt tatgttttca ctgatgtaca ttgcaacaat ggtgggcaac
      121 ctgctcattg tagggacagt gattgtcagc ccctccttag gctccccaat gtacttcttc
      181 cttgcctctc tgtcactaat ggatgctgtt tattctactg ccatctcacc caagttgatt
      241 gtagacttgc tccgtgagaa aaagaccatc tccttcagag cttgcataag ccagctcttt
      301 atagagcatt tatttggtgg ggttgacatt gtcattctgg tggcaatggc ctatgattgc
      361 tatgtggcca tctgtaagcc actacattat ttgatcatca tgaatcgacg cgtatgtatc
      421 ctcttcttgg tgatggcctg ggcaggaggt tttgcacatg ctttgtttca agttcttgct
      481 gtatataatc ttcctttctg tggtcccaat atcattgacc actttggctg tgacatatac
      541 ccgctcttgc tacttgcatg tactgacacc tacctgattg gtctcactat cattgctaat
      601 ggtggagcca tgtgtatagt catcttcatc ctacttctac tttcttatgc aataatccta
      661 agatctctcc agaatcacag tcaggaaggg aggcacaaag ctctgtccac ctgcagctct
      721 catatcactg tgttttttct cttttttgtt ccctgtattt taatgtatgt tagacctgtt
      781 tctagttttc ctattgacaa atccatcact gtaatttata ctgttgtcac ccccgtgttg
      841 aatcctttaa tatatacttt gagaaattca gagatgaaaa attctatgga aaagctcctg
      901 cagaaaatat taagtccgaa tagactaagg cttctttgct gcttatatta ttaa
//
