LOCUS       NM_001001351             948 bp    mRNA    linear   ROD 24-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 3 subfamily A member 1
            (Or3a1), mRNA.
ACCESSION   NM_001001351 XM_220688
VERSION     NM_001001351.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 948)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000010.1.
            
            On Aug 30, 2004 this sequence version replaced XM_220688.2.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-948               JAXUCZ010000010.1  59645520-59646467   c
FEATURES             Location/Qualifiers
     source          1..948
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q24"
     gene            1..948
                     /gene="Or3a1"
                     /gene_synonym="Olr1517"
                     /note="olfactory receptor family 3 subfamily A member 1"
                     /db_xref="GeneID:287516"
                     /db_xref="RGD:1333892"
     CDS             1..948
                     /gene="Or3a1"
                     /gene_synonym="Olr1517"
                     /note="olfactory receptor gene Olr1517; olfactory receptor
                     1517"
                     /codon_start=1
                     /product="olfactory receptor Olr1517"
                     /protein_id="NP_001001351.1"
                     /db_xref="GeneID:287516"
                     /db_xref="RGD:1333892"
                     /translation="MQQVPKANGTTVAEFILLGLVETPELWPVVFILFLLAYMTTVGG
                     NLSILAAVLVEPKLHTPMYFFLGNLSVMDVGCISVTIPSMLVRLLARKHTIPYGDCLT
                     QLFFFHLLVGVDCFLLTAMAYDRFLAICRPLTYSTRMNHSVQRILVASSWACAFSNAL
                     THTVAISTLHFCGPNVINHFYCDLPQLFQLSCSSTQINELLLFGVGFIMAGTPMALIF
                     TSYIHVAAAVLRIRSAEGRKKAFSTCSSHLTVVAIFYGTGIFNYMRLGSTKLSDKDKA
                     IGIFNTVINPMLNPLIYSLRNPDVQAALWRVLTGRRPAA"
     exon            1..948
                     /gene="Or3a1"
                     /gene_synonym="Olr1517"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgcagcaag ttcctaaagc caatggaacc actgtggctg agttcatcct gctgggtttg
       61 gtggagacac cagagctgtg gccagttgtc ttcatactct tcctcttggc ttacatgacc
      121 actgttgggg gcaacctgag catcctggca gctgtcttgg tggaacccaa actgcacacc
      181 cccatgtact ttttcctggg gaatctgtca gtgatggatg tggggtgcat cagtgtcact
      241 attccctcca tgttggttcg gctcttggcc cgcaagcata caattccata tggagactgc
      301 ctcacacaac tcttcttttt ccatctgctg gttggggttg actgcttcct attgacagcc
      361 atggcttatg accgtttcct ggccatctgc cggcccctta cctatagcac ccgaatgaac
      421 cattcagtcc agaggatttt ggtggcctca tcctgggctt gtgccttcag caatgcactg
      481 actcacactg tagccatatc cacacttcac ttctgtggcc ccaatgtgat caatcacttc
      541 tactgtgacc ttccccagct cttccagctc tcctgctcca gcacccagat caatgagctg
      601 ctgctctttg gagtgggttt cataatggca ggaaccccca tggcactcat tttcacctcc
      661 tacatccacg tggcagctgc tgttctgcga attcgctctg ctgaaggtag gaagaaagct
      721 ttctccacat gcagctctca cctcactgtg gtggccatat tctatggcac aggtatcttt
      781 aactacatga gacttggctc caccaaactt tcagataagg ataaagctat tgggattttc
      841 aacactgtaa tcaaccctat gctgaaccca ctcatctaca gcctcaggaa tcctgatgtt
      901 caggccgccc tctggagggt actcacaggg agacggccgg cagcttga
//
