LOCUS       NM_001001093             936 bp    mRNA    linear   ROD 26-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 2 subfamily Y member 1
            (Or2y1), mRNA.
ACCESSION   NM_001001093
VERSION     NM_001001093.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 936)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000010.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-936               JAXUCZ010000010.1  34258313-34259248
FEATURES             Location/Qualifiers
     source          1..936
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q21"
     gene            1..936
                     /gene="Or2y1"
                     /gene_synonym="Olr1396"
                     /note="olfactory receptor family 2 subfamily Y member 1"
                     /db_xref="GeneID:405987"
                     /db_xref="RGD:1333440"
     CDS             1..936
                     /gene="Or2y1"
                     /gene_synonym="Olr1396"
                     /note="olfactory receptor gene Olr1396; olfactory receptor
                     1396"
                     /codon_start=1
                     /product="olfactory receptor Olr1396"
                     /protein_id="NP_001001093.1"
                     /db_xref="GeneID:405987"
                     /db_xref="RGD:1333440"
                     /translation="MDSFNATLEERFILVGFSDWPQLELILFVFISIVYSLTLFGNTA
                     IIALSRMDLRLHTPMYFFLSHLSFLDLCYTTSTVPQLLINLHGLDRIISYGRCVAQLF
                     ISLALGSTECVLLVVMAFDRYAAVCRPLHYTTIMHPVLCQALAIASWVGGFLNSLIQT
                     GLMMTIPLCGRRLNHFFCEMPVLLKLACKDTGDTEAKMFVARAIILVFPATLILGSYG
                     HIARAVLKVKSMAGRRKAFGTCGSHLLVVSLFYGSAIYTYLQPKGSYSESDGKFVALF
                     YTIVTPMLNPLIYTLRNKDVKGALWKVLGRSTGQE"
     exon            1..936
                     /gene="Or2y1"
                     /gene_synonym="Olr1396"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atggacagtt tcaatgccac tttagaagag agattcattt tggtgggctt ttcagattgg
       61 cctcagctgg aactcatcct ttttgttttt atttcaattg tctactccct aactctcttt
      121 ggcaacaccg ccatcatagc tctctcccga atggaccttc gattacacac ccccatgtac
      181 ttcttcctct cacacctctc cttcctggac ctctgctaca ccaccagcac cgtgccccag
      241 ctcctgatca acctgcatgg acttgacagg atcatcagct atggaaggtg tgtggcccag
      301 ctgtttatat ctcttgctct gggatccact gagtgtgtgc tcctggtggt gatggctttt
      361 gaccgctatg ctgctgtgtg tcgtccactg cactacacga ccatcatgca ccctgttctc
      421 tgccaggcat tggccattgc ttcctgggta ggaggcttct tgaactctct gattcaaaca
      481 ggactcatga tgaccatacc gctctgtgga cgccgactaa atcatttctt ctgtgagatg
      541 cctgtgctcc tcaagttagc ctgcaaggac acaggagata cagaggccaa gatgtttgtg
      601 gccagagcca taatcttggt cttccctgca acattaattc ttggctccta tggacacatt
      661 gctagagcag tattgaaggt aaagtcaatg gctggccgca gaaaggcttt tgggacatgt
      721 gggtcccacc tcctggtggt ttccctgttt tatggctcag ccatttacac atacttgcaa
      781 cccaagggta gttattctga gagtgatgga aagtttgttg ccctttttta tactatagtg
      841 actcccatgc tcaacccttt gatctatacc ctgaggaaca aggatgtgaa gggcgctctg
      901 tggaaggtgc tagggaggag cacaggccaa gagtag
//
