LOCUS       NM_001000008             945 bp    mRNA    linear   ROD 26-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 2 subfamily T member 48
            (Or2t48), mRNA.
ACCESSION   NM_001000008 XM_220463
VERSION     NM_001000008.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 945)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000010.1.
            
            On Aug 30, 2004 this sequence version replaced XM_220463.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript is intronless :: SRR26360190.211488.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-945               JAXUCZ010000010.1  43287192-43288136   c
FEATURES             Location/Qualifiers
     source          1..945
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q22"
     gene            1..945
                     /gene="Or2t48"
                     /gene_synonym="Olr1418; ratchr10-44268478-44267534_ORF"
                     /note="olfactory receptor family 2 subfamily T member 48"
                     /db_xref="GeneID:287313"
                     /db_xref="RGD:1333422"
     CDS             1..945
                     /gene="Or2t48"
                     /gene_synonym="Olr1418; ratchr10-44268478-44267534_ORF"
                     /note="olfactory receptor gene Olr1418; olfactory receptor
                     1418"
                     /codon_start=1
                     /product="olfactory receptor Olr1418"
                     /protein_id="NP_001000008.1"
                     /db_xref="GeneID:287313"
                     /db_xref="RGD:1333422"
                     /translation="MNNYTGQSGFTLVGFLSQSKHPALLAVVIFMVFLMALSGNALLI
                     LLILSDTHLHTPMYFFISQLSLMDMMCISVTVPKMLMNQMLENYRISAAACGMQMFLY
                     LTLAGSEFLLLAAMSYDRYVAICHPLRYHVLMNHRVCILLVYSCWLLGSLDGFIFTPV
                     TMTFPFCGSREIYHFYCEVLAVTKLSCSDTWLYETLMYVCCVIMLLIPVTVISGSYSS
                     ILLTVLRMNSTEGRKKALATCSSHMTVVIIFYGTAIYNYMLPASLHTPEKDMVVSVFY
                     TILTPLLNPLIYSFRNKNVTEAMRKWFGMSTLFQQIVK"
     exon            1..945
                     /gene="Or2t48"
                     /gene_synonym="Olr1418; ratchr10-44268478-44267534_ORF"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgaacaact acaccggaca atcaggtttc accctggtgg gattcttaag tcaatccaaa
       61 cacccggccc tgcttgctgt tgtcatattt atggttttcc tgatggcctt gtctgggaac
      121 gccctcctga tcctgctgat actctctgac acacacctcc acacacccat gtactttttt
      181 atcagccagc tgtccctcat ggacatgatg tgcatttctg tcactgtacc caagatgctc
      241 atgaaccaga tgctggagaa ctacaggatc tcagctgctg cctgtgggat gcagatgttc
      301 ctctacctga cactagcagg ttcagaattc ttgcttctag ctgccatgtc ttatgaccgc
      361 tatgtggcca tctgccatcc actccggtat catgtcctca tgaaccacag ggtgtgtatc
      421 ctcctggtat attcctgttg gctcctggga tccttagatg gcttcatatt cacccctgtc
      481 accatgacct tcccattctg tgggtcacgg gagatctatc acttctactg tgaggttctg
      541 gctgtgacaa agctctcctg ctcagacacc tggctctatg agaccttaat gtatgtgtgc
      601 tgtgtgatca tgcttctcat ccctgtgaca gtcatttcag gatcctactc atccatcctc
      661 ctcactgttc tcaggatgaa ctcaacagag ggcaggaaga aggctcttgc aacatgctcc
      721 tcccacatga ctgtggtcat catcttctat ggcactgcta tctataacta catgctccct
      781 gcctccctcc acactcctga gaaggacatg gtggtgtctg tgttttatac catactcaca
      841 ccactgttga acccactaat atatagtttt aggaataaga atgtcactga ggctatgcgg
      901 aaatggtttg gtatgagcac cctcttccaa caaattgtaa agtaa
//
