LOCUS       NM_001000892             939 bp    mRNA    linear   ROD 26-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 2 subfamily N member 1L
            (Or2n1l), mRNA.
ACCESSION   NM_001000892 XM_001081288
VERSION     NM_001000892.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 939)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000020.1.
            
            On Jun 25, 2006 this sequence version replaced XM_001081288.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-939               JAXUCZ010000020.1  345864-346802       c
FEATURES             Location/Qualifiers
     source          1..939
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="20"
                     /map="20p12"
     gene            1..939
                     /gene="Or2n1l"
                     /gene_synonym="Olr1679"
                     /note="olfactory receptor family 2 subfamily N member 1L"
                     /db_xref="GeneID:405193"
                     /db_xref="RGD:1333696"
     CDS             1..939
                     /gene="Or2n1l"
                     /gene_synonym="Olr1679"
                     /note="olfactory receptor gene Olr1679; olfactory receptor
                     1679; putative olfactory receptor 2B3; olfactory receptor
                     2B11-like"
                     /codon_start=1
                     /product="olfactory receptor Olr1679"
                     /protein_id="NP_001000892.1"
                     /db_xref="GeneID:405193"
                     /db_xref="RGD:1333696"
                     /translation="MTLINTSHPEEFILLSFADRPWLELPLFIFLLVTYPTAVIGNIA
                     IILASILDPCLHSPMYFFLTNLSFLDICYTTSIVPQMLTNLGGSTKAISYMRCAVQLY
                     FYHTMGVAECVLLALMSFDRYVAICKPLHYTLIMNQCNCLLLVSIVWLTGISFAITEA
                     TVTLQLPLCGHNKMDHLVCEIPVLIKIACGEKETNELALTVVSIFLSAVPLCLILASY
                     ASIGHAVFKIKSSEGRKKAFGTCSSHLIVVLLFYGPAISMYLQPPSSITKDQPKFMAL
                     LYGVVTPTLNPFIYTLRNKDVKRALANLFRNIFMSK"
     exon            1..939
                     /gene="Or2n1l"
                     /gene_synonym="Olr1679"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgacactga tcaatacaag tcacccagaa gagtttattc tacttagttt tgcagaccgt
       61 ccttggctgg aacttcctct ctttattttt cttctggtaa cataccccac agccgtgatt
      121 ggaaacattg ccatcattct ggcttccata ttagacccct gtctccacag ccccatgtat
      181 ttcttcctca ccaacctctc ctttctggac atatgctaca ccacaagcat tgtgcctcag
      241 atgctaacta accttggagg ctccacaaag gccatcagct acatgaggtg tgcagttcag
      301 ctttatttct accacactat gggggttgca gagtgtgttc tcctggctct tatgtccttt
      361 gaccgatatg tagccatctg caaacctcta cactacaccc tcataatgaa tcaatgtaac
      421 tgtctcctct tagtctccat tgtgtggctg actggaattt cctttgctat cacagaggcc
      481 actgtgactc tgcaattgcc tctatgtggc cacaataaaa tggatcactt ggtgtgtgag
      541 attccagttc tcataaaaat tgcttgtggt gaaaaagaaa caaatgagct tgctctgact
      601 gtggtatcca tttttctttc agctgttcct ctgtgtttaa ttcttgcctc ctatgctagt
      661 attgggcatg ctgtctttaa aatcaaatct tcagagggaa ggaaaaaggc ctttgggaca
      721 tgttcctctc atctcattgt agttctcttg ttctatggcc cagccattag catgtatctt
      781 cagcctccct cctctattac aaaagaccaa cccaagttca tggctctctt gtatggagta
      841 gtaactccta cactgaaccc cttcatctat actctgagga ataaggatgt aaagagggca
      901 ttagctaatc tgttcaggaa tatttttatg tcaaagtga
//
