LOCUS       NM_001000890             939 bp    mRNA    linear   ROD 26-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 2 subfamily N member 1I
            (Or2n1i), mRNA.
ACCESSION   NM_001000890
VERSION     NM_001000890.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 939)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 939)
  AUTHORS   Gibbs,R.A., Weinstock,G.M., Metzker,M.L., Muzny,D.M.,
            Sodergren,E.J., Scherer,S., Scott,G., Steffen,D., Worley,K.C.,
            Burch,P.E., Okwuonu,G., Hines,S., Lewis,L., DeRamo,C., Delgado,O.,
            Dugan-Rocha,S., Miner,G., Morgan,M., Hawes,A., Gill,R., Celera,
            Holt,R.A., Adams,M.D., Amanatides,P.G., Baden-Tillson,H.,
            Barnstead,M., Chin,S., Evans,C.A., Ferriera,S., Fosler,C.,
            Glodek,A., Gu,Z., Jennings,D., Kraft,C.L., Nguyen,T.,
            Pfannkoch,C.M., Sitter,C., Sutton,G.G., Venter,J.C., Woodage,T.,
            Smith,D., Lee,H.M., Gustafson,E., Cahill,P., Kana,A.,
            Doucette-Stamm,L., Weinstock,K., Fechtel,K., Weiss,R.B., Dunn,D.M.,
            Green,E.D., Blakesley,R.W., Bouffard,G.G., De Jong,P.J.,
            Osoegawa,K., Zhu,B., Marra,M., Schein,J., Bosdet,I., Fjell,C.,
            Jones,S., Krzywinski,M., Mathewson,C., Siddiqui,A., Wye,N.,
            McPherson,J., Zhao,S., Fraser,C.M., Shetty,J., Shatsman,S.,
            Geer,K., Chen,Y., Abramzon,S., Nierman,W.C., Havlak,P.H., Chen,R.,
            Durbin,K.J., Simons,R., Ren,Y., Song,X.Z., Li,B., Liu,Y., Qin,X.,
            Cawley,S., Worley,K.C., Cooney,A.J., D'Souza,L.M., Martin,K.,
            Wu,J.Q., Gonzalez-Garay,M.L., Jackson,A.R., Kalafus,K.J.,
            McLeod,M.P., Milosavljevic,A., Virk,D., Volkov,A., Wheeler,D.A.,
            Zhang,Z., Bailey,J.A., Eichler,E.E., Tuzun,E., Birney,E.,
            Mongin,E., Ureta-Vidal,A., Woodwark,C., Zdobnov,E., Bork,P.,
            Suyama,M., Torrents,D., Alexandersson,M., Trask,B.J., Young,J.M.,
            Huang,H., Wang,H., Xing,H., Daniels,S., Gietzen,D., Schmidt,J.,
            Stevens,K., Vitt,U., Wingrove,J., Camara,F., Mar Alba,M.,
            Abril,J.F., Guigo,R., Smit,A., Dubchak,I., Rubin,E.M., Couronne,O.,
            Poliakov,A., Hubner,N., Ganten,D., Goesele,C., Hummel,O.,
            Kreitler,T., Lee,Y.A., Monti,J., Schulz,H., Zimdahl,H.,
            Himmelbauer,H., Lehrach,H., Jacob,H.J., Bromberg,S.,
            Gullings-Handley,J., Jensen-Seaman,M.I., Kwitek,A.E., Lazar,J.,
            Pasko,D., Tonellato,P.J., Twigger,S., Ponting,C.P., Duarte,J.M.,
            Rice,S., Goodstadt,L., Beatson,S.A., Emes,R.D., Winter,E.E.,
            Webber,C., Brandt,P., Nyakatura,G., Adetobi,M., Chiaromonte,F.,
            Elnitski,L., Eswara,P., Hardison,R.C., Hou,M., Kolbe,D., Makova,K.,
            Miller,W., Nekrutenko,A., Riemer,C., Schwartz,S., Taylor,J.,
            Yang,S., Zhang,Y., Lindpaintner,K., Andrews,T.D., Caccamo,M.,
            Clamp,M., Clarke,L., Curwen,V., Durbin,R., Eyras,E., Searle,S.M.,
            Cooper,G.M., Batzoglou,S., Brudno,M., Sidow,A., Stone,E.A.,
            Venter,J.C., Payseur,B.A., Bourque,G., Lopez-Otin,C., Puente,X.S.,
            Chakrabarti,K., Chatterji,S., Dewey,C., Pachter,L., Bray,N.,
            Yap,V.B., Caspi,A., Tesler,G., Pevzner,P.A., Haussler,D.,
            Roskin,K.M., Baertsch,R., Clawson,H., Furey,T.S., Hinrichs,A.S.,
            Karolchik,D., Kent,W.J., Rosenbloom,K.R., Trumbower,H.,
            Weirauch,M., Cooper,D.N., Stenson,P.D., Ma,B., Brent,M.,
            Arumugam,M., Shteynberg,D., Copley,R.R., Taylor,M.S., Riethman,H.,
            Mudunuri,U., Peterson,J., Guyer,M., Felsenfeld,A., Old,S.,
            Mockrin,S. and Collins,F.
  CONSRTM   Rat Genome Sequencing Project Consortium
  TITLE     Genome sequence of the Brown Norway rat yields insights into
            mammalian evolution
  JOURNAL   Nature 428 (6982), 493-521 (2004)
   PUBMED   15057822
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000020.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-939               JAXUCZ010000020.1  389914-390852       c
FEATURES             Location/Qualifiers
     source          1..939
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="20"
                     /map="20p12"
     gene            1..939
                     /gene="Or2n1i"
                     /gene_synonym="Olr1682"
                     /note="olfactory receptor family 2 subfamily N member 1I"
                     /db_xref="GeneID:405191"
                     /db_xref="RGD:1333942"
     CDS             1..939
                     /gene="Or2n1i"
                     /gene_synonym="Olr1682"
                     /note="olfactory receptor gene Olr1682; olfactory receptor
                     1682"
                     /codon_start=1
                     /product="olfactory receptor Olr1682"
                     /protein_id="NP_001000890.1"
                     /db_xref="GeneID:405191"
                     /db_xref="RGD:1333942"
                     /translation="MTLINTSHPEEFILLGFADRPWLELPLFIILLVTYPTAMIGNIA
                     IILVSILDPCLHSPMYFFLTNLSFLDICYTTSLVPQMLTNLGGSTKTISYMSCAVQLY
                     FFHTMGVTECILLALMSFDRYVAICKPLHYTLIMNQRKCLLLVSIMWLTGITYAVTEA
                     TVTLQLPLCGHNKMDHLVCEIPVLIKIACGEKEMNELALSVVCIFLSAVPLCLILASY
                     ASIGHAVFKIKSSEGRKKAFGTCSSHLIVVLLFYGPAISMYLQPPSSITKDQPKFMAL
                     LYGVVTPTLNPFIYTLRNKDVKGALGNLFRNIFMSK"
     exon            1..939
                     /gene="Or2n1i"
                     /gene_synonym="Olr1682"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgacactga tcaatacaag tcacccagaa gagtttattc tacttggttt tgcagaccgt
       61 ccttggctag aacttcctct ctttattatt cttctggtaa cataccccac agccatgatt
      121 ggaaacattg ccatcattct ggtgtccatt ttagacccct gtctacatag ccccatgtat
      181 ttcttcctca ccaacctctc ctttctggac atttgctaca ccacaagcct tgtgcctcag
      241 atgctaacta accttggggg ctccacaaag accatcagct acatgagttg tgcagttcag
      301 ctctatttct tccacacaat gggggtcaca gagtgtatcc tcctggctct tatgtccttt
      361 gaccgatatg tagccatctg caaaccactg cactataccc tcataatgaa tcagcgtaaa
      421 tgcctcctgt tagtgtccat tatgtggctg actggaatta cctatgctgt tacagaggcc
      481 actgtaactc tgcaattgcc tctatgtggc cacaataaaa tggatcactt ggtgtgtgag
      541 attccagttc tcataaaaat tgcttgtggt gaaaaagaaa tgaatgagct tgctttgtct
      601 gtggtatgca tttttctttc agctgttcct ctgtgtttaa ttcttgcctc ctatgctagt
      661 attgggcatg ctgtctttaa aatcaaatct tcagagggaa ggaaaaaggc ctttgggaca
      721 tgttcctctc acctcattgt ggttctcttg ttctatggtc cagccattag catgtatctt
      781 cagcctccct cctctattac aaaagaccaa cccaagttca tggctctctt gtatggagta
      841 gtaactccta cactgaaccc cttcatctat actctgagga acaaggatgt aaagggggca
      901 ttaggtaatc tattcaggaa tatttttatg tcaaagtga
//
