LOCUS       NM_001000504             966 bp    mRNA    linear   ROD 24-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 2 subfamily AT member 1
            (Or2at1), mRNA.
ACCESSION   NM_001000504 XM_218958
VERSION     NM_001000504.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 966)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 966)
  AUTHORS   Gibbs,R.A., Weinstock,G.M., Metzker,M.L., Muzny,D.M.,
            Sodergren,E.J., Scherer,S., Scott,G., Steffen,D., Worley,K.C.,
            Burch,P.E., Okwuonu,G., Hines,S., Lewis,L., DeRamo,C., Delgado,O.,
            Dugan-Rocha,S., Miner,G., Morgan,M., Hawes,A., Gill,R., Celera,
            Holt,R.A., Adams,M.D., Amanatides,P.G., Baden-Tillson,H.,
            Barnstead,M., Chin,S., Evans,C.A., Ferriera,S., Fosler,C.,
            Glodek,A., Gu,Z., Jennings,D., Kraft,C.L., Nguyen,T.,
            Pfannkoch,C.M., Sitter,C., Sutton,G.G., Venter,J.C., Woodage,T.,
            Smith,D., Lee,H.M., Gustafson,E., Cahill,P., Kana,A.,
            Doucette-Stamm,L., Weinstock,K., Fechtel,K., Weiss,R.B., Dunn,D.M.,
            Green,E.D., Blakesley,R.W., Bouffard,G.G., De Jong,P.J.,
            Osoegawa,K., Zhu,B., Marra,M., Schein,J., Bosdet,I., Fjell,C.,
            Jones,S., Krzywinski,M., Mathewson,C., Siddiqui,A., Wye,N.,
            McPherson,J., Zhao,S., Fraser,C.M., Shetty,J., Shatsman,S.,
            Geer,K., Chen,Y., Abramzon,S., Nierman,W.C., Havlak,P.H., Chen,R.,
            Durbin,K.J., Simons,R., Ren,Y., Song,X.Z., Li,B., Liu,Y., Qin,X.,
            Cawley,S., Worley,K.C., Cooney,A.J., D'Souza,L.M., Martin,K.,
            Wu,J.Q., Gonzalez-Garay,M.L., Jackson,A.R., Kalafus,K.J.,
            McLeod,M.P., Milosavljevic,A., Virk,D., Volkov,A., Wheeler,D.A.,
            Zhang,Z., Bailey,J.A., Eichler,E.E., Tuzun,E., Birney,E.,
            Mongin,E., Ureta-Vidal,A., Woodwark,C., Zdobnov,E., Bork,P.,
            Suyama,M., Torrents,D., Alexandersson,M., Trask,B.J., Young,J.M.,
            Huang,H., Wang,H., Xing,H., Daniels,S., Gietzen,D., Schmidt,J.,
            Stevens,K., Vitt,U., Wingrove,J., Camara,F., Mar Alba,M.,
            Abril,J.F., Guigo,R., Smit,A., Dubchak,I., Rubin,E.M., Couronne,O.,
            Poliakov,A., Hubner,N., Ganten,D., Goesele,C., Hummel,O.,
            Kreitler,T., Lee,Y.A., Monti,J., Schulz,H., Zimdahl,H.,
            Himmelbauer,H., Lehrach,H., Jacob,H.J., Bromberg,S.,
            Gullings-Handley,J., Jensen-Seaman,M.I., Kwitek,A.E., Lazar,J.,
            Pasko,D., Tonellato,P.J., Twigger,S., Ponting,C.P., Duarte,J.M.,
            Rice,S., Goodstadt,L., Beatson,S.A., Emes,R.D., Winter,E.E.,
            Webber,C., Brandt,P., Nyakatura,G., Adetobi,M., Chiaromonte,F.,
            Elnitski,L., Eswara,P., Hardison,R.C., Hou,M., Kolbe,D., Makova,K.,
            Miller,W., Nekrutenko,A., Riemer,C., Schwartz,S., Taylor,J.,
            Yang,S., Zhang,Y., Lindpaintner,K., Andrews,T.D., Caccamo,M.,
            Clamp,M., Clarke,L., Curwen,V., Durbin,R., Eyras,E., Searle,S.M.,
            Cooper,G.M., Batzoglou,S., Brudno,M., Sidow,A., Stone,E.A.,
            Venter,J.C., Payseur,B.A., Bourque,G., Lopez-Otin,C., Puente,X.S.,
            Chakrabarti,K., Chatterji,S., Dewey,C., Pachter,L., Bray,N.,
            Yap,V.B., Caspi,A., Tesler,G., Pevzner,P.A., Haussler,D.,
            Roskin,K.M., Baertsch,R., Clawson,H., Furey,T.S., Hinrichs,A.S.,
            Karolchik,D., Kent,W.J., Rosenbloom,K.R., Trumbower,H.,
            Weirauch,M., Cooper,D.N., Stenson,P.D., Ma,B., Brent,M.,
            Arumugam,M., Shteynberg,D., Copley,R.R., Taylor,M.S., Riethman,H.,
            Mudunuri,U., Peterson,J., Guyer,M., Felsenfeld,A., Old,S.,
            Mockrin,S. and Collins,F.
  CONSRTM   Rat Genome Sequencing Project Consortium
  TITLE     Genome sequence of the Brown Norway rat yields insights into
            mammalian evolution
  JOURNAL   Nature 428 (6982), 493-521 (2004)
   PUBMED   15057822
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Aug 30, 2004 this sequence version replaced XM_218958.2.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-966               JAXUCZ010000001.1  163501335-163502300
FEATURES             Location/Qualifiers
     source          1..966
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q32"
     gene            1..966
                     /gene="Or2at1"
                     /gene_synonym="Olr37"
                     /note="olfactory receptor family 2 subfamily AT member 1"
                     /db_xref="GeneID:308853"
                     /db_xref="RGD:1332982"
     CDS             1..966
                     /gene="Or2at1"
                     /gene_synonym="Olr37"
                     /note="olfactory receptor gene Olr37; olfactory receptor
                     37"
                     /codon_start=1
                     /product="olfactory receptor Olr37"
                     /protein_id="NP_001000504.1"
                     /db_xref="GeneID:308853"
                     /db_xref="RGD:1332982"
                     /translation="MENIACNGSGDSQTSFYLIGIPSLQKSLFLPVFFIFLLLYLLIL
                     MGNTLILVAVVAEPSLHKPMYFFLINLSALDILFTTTTVPKMLSLLLLGDRLLSFPAC
                     FLQMYLFHSFSCSEAFILVVMAYDRYVAICRPLHYPVHMTPQTNTALAASAWITALLL
                     PIPAVVQTSHMAFDNIAYIYHCFCDHLAVVQASCSDTSPQTLMGFCIAMVVSFLPLLL
                     VLLSYVRILISVLRINSKEGRSKAFSTCSSHLLVVGTYYSSIAISYVAYRADLPVDFH
                     IMGNVVYAILTPVLNPIIYTLRNKDVKAAITKIVCHQDPKSIGKP"
     exon            1..966
                     /gene="Or2at1"
                     /gene_synonym="Olr37"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atggagaaca tagcctgtaa tgggtcaggg gactctcaga ccagcttcta ccttataggc
       61 atcccctctc tgcaaaaatc cctcttcctt cctgtcttct tcatctttct cctcctctac
      121 cttctcatcc tcatggggaa cactctgatc ctggtagctg tggtggccga gcccagcctc
      181 cacaagccca tgtacttctt cctaatcaac ctctcagctc tagacatcct cttcaccacc
      241 accactgtcc cgaagatgct gtccctactc ctgctgggag accgcttgct cagcttccct
      301 gcctgcttcc tgcagatgta tctattccac agcttctcct gctcagaagc cttcatcttg
      361 gtggtcatgg cctatgaccg ctatgtggct atctgccgcc ctctgcacta ccccgtccac
      421 atgaccccac agacaaacac tgcactggca gccagtgcct ggatcaccgc cctcctcctg
      481 cccatcccag cagtggtaca gacttcccac atggcatttg acaacatcgc ctacatctac
      541 cactgcttct gtgaccacct ggccgtggtc caggcttcct gctcagacac cagtccccag
      601 acgctcatgg gcttctgcat tgccatggtg gtgtctttcc tccccctcct cctggtgctc
      661 ctctcctatg tgcgaatcct gatctcagtg cttcggatca actccaagga agggcgttcc
      721 aaagccttct ccacctgcag ctcccacctc ctggtggtgg gcacctacta ctcgtccatt
      781 gccatatcct atgtggccta cagggctgac ctccccgtag acttccacat catggggaac
      841 gtggtctatg ccattctcac acctgttctc aaccctatca tctacaccct gaggaacaaa
      901 gatgtcaagg cggccatcac taaaattgtc tgtcaccagg atccaaagag tattggaaag
      961 ccctag
//
