LOCUS       NM_001000193             948 bp    mRNA    linear   ROD 24-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 2 subfamily AG member
            16B (Or2ag16b), mRNA.
ACCESSION   NM_001000193 XM_219138
VERSION     NM_001000193.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 948)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 948)
  AUTHORS   Gibbs,R.A., Weinstock,G.M., Metzker,M.L., Muzny,D.M.,
            Sodergren,E.J., Scherer,S., Scott,G., Steffen,D., Worley,K.C.,
            Burch,P.E., Okwuonu,G., Hines,S., Lewis,L., DeRamo,C., Delgado,O.,
            Dugan-Rocha,S., Miner,G., Morgan,M., Hawes,A., Gill,R., Celera,
            Holt,R.A., Adams,M.D., Amanatides,P.G., Baden-Tillson,H.,
            Barnstead,M., Chin,S., Evans,C.A., Ferriera,S., Fosler,C.,
            Glodek,A., Gu,Z., Jennings,D., Kraft,C.L., Nguyen,T.,
            Pfannkoch,C.M., Sitter,C., Sutton,G.G., Venter,J.C., Woodage,T.,
            Smith,D., Lee,H.M., Gustafson,E., Cahill,P., Kana,A.,
            Doucette-Stamm,L., Weinstock,K., Fechtel,K., Weiss,R.B., Dunn,D.M.,
            Green,E.D., Blakesley,R.W., Bouffard,G.G., De Jong,P.J.,
            Osoegawa,K., Zhu,B., Marra,M., Schein,J., Bosdet,I., Fjell,C.,
            Jones,S., Krzywinski,M., Mathewson,C., Siddiqui,A., Wye,N.,
            McPherson,J., Zhao,S., Fraser,C.M., Shetty,J., Shatsman,S.,
            Geer,K., Chen,Y., Abramzon,S., Nierman,W.C., Havlak,P.H., Chen,R.,
            Durbin,K.J., Simons,R., Ren,Y., Song,X.Z., Li,B., Liu,Y., Qin,X.,
            Cawley,S., Worley,K.C., Cooney,A.J., D'Souza,L.M., Martin,K.,
            Wu,J.Q., Gonzalez-Garay,M.L., Jackson,A.R., Kalafus,K.J.,
            McLeod,M.P., Milosavljevic,A., Virk,D., Volkov,A., Wheeler,D.A.,
            Zhang,Z., Bailey,J.A., Eichler,E.E., Tuzun,E., Birney,E.,
            Mongin,E., Ureta-Vidal,A., Woodwark,C., Zdobnov,E., Bork,P.,
            Suyama,M., Torrents,D., Alexandersson,M., Trask,B.J., Young,J.M.,
            Huang,H., Wang,H., Xing,H., Daniels,S., Gietzen,D., Schmidt,J.,
            Stevens,K., Vitt,U., Wingrove,J., Camara,F., Mar Alba,M.,
            Abril,J.F., Guigo,R., Smit,A., Dubchak,I., Rubin,E.M., Couronne,O.,
            Poliakov,A., Hubner,N., Ganten,D., Goesele,C., Hummel,O.,
            Kreitler,T., Lee,Y.A., Monti,J., Schulz,H., Zimdahl,H.,
            Himmelbauer,H., Lehrach,H., Jacob,H.J., Bromberg,S.,
            Gullings-Handley,J., Jensen-Seaman,M.I., Kwitek,A.E., Lazar,J.,
            Pasko,D., Tonellato,P.J., Twigger,S., Ponting,C.P., Duarte,J.M.,
            Rice,S., Goodstadt,L., Beatson,S.A., Emes,R.D., Winter,E.E.,
            Webber,C., Brandt,P., Nyakatura,G., Adetobi,M., Chiaromonte,F.,
            Elnitski,L., Eswara,P., Hardison,R.C., Hou,M., Kolbe,D., Makova,K.,
            Miller,W., Nekrutenko,A., Riemer,C., Schwartz,S., Taylor,J.,
            Yang,S., Zhang,Y., Lindpaintner,K., Andrews,T.D., Caccamo,M.,
            Clamp,M., Clarke,L., Curwen,V., Durbin,R., Eyras,E., Searle,S.M.,
            Cooper,G.M., Batzoglou,S., Brudno,M., Sidow,A., Stone,E.A.,
            Venter,J.C., Payseur,B.A., Bourque,G., Lopez-Otin,C., Puente,X.S.,
            Chakrabarti,K., Chatterji,S., Dewey,C., Pachter,L., Bray,N.,
            Yap,V.B., Caspi,A., Tesler,G., Pevzner,P.A., Haussler,D.,
            Roskin,K.M., Baertsch,R., Clawson,H., Furey,T.S., Hinrichs,A.S.,
            Karolchik,D., Kent,W.J., Rosenbloom,K.R., Trumbower,H.,
            Weirauch,M., Cooper,D.N., Stenson,P.D., Ma,B., Brent,M.,
            Arumugam,M., Shteynberg,D., Copley,R.R., Taylor,M.S., Riethman,H.,
            Mudunuri,U., Peterson,J., Guyer,M., Felsenfeld,A., Old,S.,
            Mockrin,S. and Collins,F.
  CONSRTM   Rat Genome Sequencing Project Consortium
  TITLE     Genome sequence of the Brown Norway rat yields insights into
            mammalian evolution
  JOURNAL   Nature 428 (6982), 493-521 (2004)
   PUBMED   15057822
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Aug 30, 2004 this sequence version replaced XM_219138.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-948               JAXUCZ010000001.1  169888542-169889489 c
FEATURES             Location/Qualifiers
     source          1..948
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q33"
     gene            1..948
                     /gene="Or2ag16b"
                     /gene_synonym="Olr206"
                     /note="olfactory receptor family 2 subfamily AG member
                     16B"
                     /db_xref="GeneID:293353"
                     /db_xref="RGD:1333885"
     CDS             1..948
                     /gene="Or2ag16b"
                     /gene_synonym="Olr206"
                     /note="olfactory receptor gene Olr206; olfactory receptor
                     206"
                     /codon_start=1
                     /product="olfactory receptor Olr206"
                     /protein_id="NP_001000193.1"
                     /db_xref="GeneID:293353"
                     /db_xref="RGD:1333885"
                     /translation="MELWNSTLGSGFILVGILDGSGSPELLCATITALYFLALTSNGL
                     LLLVITMDARLHVPMYLLLGQLSLMDLLLTSVITPKAVVDFLLKDNTISFGGCALQMF
                     LELALGTAEDLLLAFMAYDRYVAICQPLNYTILMSHKVCWLMIATSWILASLSALGYS
                     IYTMQYSFCKSRMVNHLFCEIPPLLKLACADTSRYELMVYLMGVIALLLPLAAILASY
                     SLILFTVLHMPSNESRKKALVTCSSHLTVVGMWYGGASFMYVLPSPFHTAKQDNISSV
                     FYTIVTPALNPLIYSLRNKEVTGALKRVLRKRLSTQPNL"
     exon            1..948
                     /gene="Or2ag16b"
                     /gene_synonym="Olr206"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atggagctct ggaactcgac cttgggaagt ggcttcatct tggtggggat tctagatggc
       61 agtggctctc ctgaactgct ctgtgccaca atcacagcct tgtacttctt agccctaacc
      121 agcaatggac tactgctgct tgtcattacc atggatgccc ggctccacgt gcccatgtat
      181 cttctacttg gacagctgtc tctcatggac ctacttctca cttcagttat cactcccaag
      241 gctgttgtag actttctcct caaagacaac accatatcct ttggaggttg tgcccttcag
      301 atgtttctag aactggcact aggtactgca gaggaccttc ttctagcctt tatggcctat
      361 gataggtatg tagctatttg tcaacctcta aactacacaa tcttaatgag tcacaaagtc
      421 tgctggctca tgatagctac ctcatggatc ctggcatccc tcagtgctct aggatatagc
      481 atctacacca tgcagtattc cttctgcaaa tctcgtatgg tcaatcacct gttctgtgag
      541 atacccccat tgctgaagct ggcctgtgca gacacatcca gatatgaact tatggtttat
      601 ttgatgggtg tgattgcact acttcttcct cttgctgcca tcctggcctc ctactcacta
      661 attctgttca ctgtgctcca catgccctca aatgagagca ggaaaaaagc ccttgtcacc
      721 tgctcttccc acctgactgt ggttgggatg tggtatggtg gtgcttcctt catgtatgtc
      781 ctacccagtc ccttccacac cgccaaacaa gacaatatca gctcagtttt ctacacgatt
      841 gttactccag ctctgaatcc cctcatctac agcctgagga ataaggaggt cactggagct
      901 ttgaagagag tcctgaggaa acgattgtca acacagccta acctctag
//
