LOCUS       NM_001000260             948 bp    mRNA    linear   ROD 24-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 1 subfamily S member 2
            (Or1s2), mRNA.
ACCESSION   NM_001000260 XM_219655 XM_347282
VERSION     NM_001000260.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 948)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On or before Aug 30, 2004 this sequence version replaced
            XM_219655.2, XM_347282.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: This record was generated from the set of rat
            olfactory receptors mined from Rnor3.1 assembly (NCBI Build 2.1).
            
            ##Evidence-Data-START##
            Transcript is intronless :: SRR22582424.982115.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-948               JAXUCZ010000001.1  220338536-220339483
FEATURES             Location/Qualifiers
     source          1..948
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q43"
     gene            1..948
                     /gene="Or1s2"
                     /gene_synonym="Olr376; ratchr1-217038896-217039843_ORF"
                     /note="olfactory receptor family 1 subfamily S member 2"
                     /db_xref="GeneID:293809"
                     /db_xref="RGD:1333888"
     CDS             1..948
                     /gene="Or1s2"
                     /gene_synonym="Olr376; ratchr1-217038896-217039843_ORF"
                     /note="olfactory receptor gene Olr376; olfactory receptor
                     376"
                     /codon_start=1
                     /product="olfactory receptor Olr376"
                     /protein_id="NP_001000260.1"
                     /db_xref="GeneID:293809"
                     /db_xref="RGD:1333888"
                     /translation="MSQGNQTTISEFILLGLSNQAEKQKFIFVIFLSMYLVTVLGNSL
                     IILVIGLDVNLHTPMYLFLANLSFADISSSSTSVPKMLMNIQTKSQYISYEGCFTQMY
                     FSIVFVVIDNFLLGVMAYDRYVAICHPLTYTSIMHSTFCLLLTVCPWALSNIVALTHT
                     LLANQLIFCNDNTIQHFFCDLAPLLKLSCSDAMINNIVKFIVGLSVITFPFALILFSY
                     VCIIRDVLRISSMEGKWKAFSTCGSHLTVVFLFYGTIIGVYFFPLSTHPEDTDKIGAV
                     LFTVVTPMLNPFIYSLRNKDMKGAFKKLINKSHFFLLMS"
     exon            1..948
                     /gene="Or1s2"
                     /gene_synonym="Olr376; ratchr1-217038896-217039843_ORF"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgagtcaag gaaaccaaac caccatctct gaattcatcc tcctgggtct ctccaaccag
       61 gctgagaagc agaaattcat ctttgtgatt ttcttgagta tgtacctggt cactgtgctt
      121 ggaaacagtc tcatcattct ggtcattggc ttggatgtaa atcttcacac tcccatgtat
      181 ctttttcttg ccaacctatc ttttgctgat atttcttcat cttctacctc agtccccaaa
      241 atgctgatga atattcaaac caagagtcaa tacatctcct atgagggttg ctttacacag
      301 atgtactttt ccattgtgtt tgttgtcatt gacaattttc ttttgggggt catggcttat
      361 gatcgatatg tggctatctg ccaccctctg acttatacaa gcatcatgca ctccacgttt
      421 tgtcttttgc taactgtctg tccatgggcg ctaagcaata ttgttgccct gacacatact
      481 cttctggcca atcaattgat tttttgcaac gacaacacca tccaacactt cttctgtgac
      541 ttggcccctc tgctcaaact ttcctgctca gatgcaatga tcaacaatat tgtaaaattt
      601 attgtggggc tatcagtcat cacctttccc tttgccctga tccttttttc ctacgtctgc
      661 atcatcaggg atgtactgag aatttcatcc atggaaggaa agtggaaagc cttctctaca
      721 tgtggttctc acctgacagt tgtattcctc ttctatggta ccattatagg ggtttatttt
      781 tttcctttat ccactcaccc tgaggacaca gacaagattg gtgcagtact cttcacagtg
      841 gtgacaccaa tgttgaaccc tttcatctat agcctgagga ataaggacat gaaaggtgcc
      901 tttaagaagc tcatcaataa aagtcatttc ttccttttga tgtcatga
//
