LOCUS       NM_001000830             930 bp    mRNA    linear   ROD 24-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 1 subfamily J member 22
            (Or1j22), mRNA.
ACCESSION   NM_001000830
VERSION     NM_001000830.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 930)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000003.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-930               JAXUCZ010000003.1  40236165-40237094
FEATURES             Location/Qualifiers
     source          1..930
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3p11"
     gene            1..930
                     /gene="Or1j22"
                     /gene_synonym="Olr398"
                     /note="olfactory receptor family 1 subfamily J member 22"
                     /db_xref="GeneID:405119"
                     /db_xref="RGD:1333097"
     CDS             1..930
                     /gene="Or1j22"
                     /gene_synonym="Olr398"
                     /note="olfactory receptor gene Olr398; olfactory receptor
                     398"
                     /codon_start=1
                     /product="olfactory receptor Olr398"
                     /protein_id="NP_001000830.1"
                     /db_xref="GeneID:405119"
                     /db_xref="RGD:1333097"
                     /translation="MKSDNESTVSEFILLGIPIRAEDQAMYSALFLAMYLTTVLGNLL
                     IILLIRLDPHLHTPMYFFLGHLAFTDMSLSSATAPKMLTNMLTHSHFISYAGCVSQVY
                     FFTFLGSIDSFLLTSMAYDRYVAICHPLHYTIIMSQSLCVLLVFMSWTLSLANALVHT
                     LLLACLSHFRNNTIPHYFCDLSALLKLSSSDTTVNEMAILLLGIVVITLPFICILVSY
                     VHIGVTILKAPSIRGICKALSTCGSHLCVVSLYYGAIIGLYLVPSYNNNNNKDVIVSV
                     MYGLVTPMLNPFIYSLRNRDMKGALRNILNRTK"
     exon            1..930
                     /gene="Or1j22"
                     /gene_synonym="Olr398"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgaagagtg ataatgagag cactgtgtca gagtttatac tcctggggat ccccattcga
       61 gcagaagacc aagctatgta ctctgccctg ttcctggcca tgtatctgac aactgtgctg
      121 gggaacctgc tcatcatcct gctcatcagg ctggaccctc acctccacac ccccatgtac
      181 ttcttccttg gccacttggc ttttacagac atgtctttat catctgccac agctccaaag
      241 atgctaacaa atatgctgac acacagtcat tttatttcat atgctgggtg tgtttcccag
      301 gtatactttt tcacattttt ggggagcatt gacagctttc ttctgacatc catggcctat
      361 gacaggtatg tggccatctg ccaccctctg cactatacca ttatcatgag tcagagcctc
      421 tgtgttcttc tagtatttat gtcctggact ttatctttgg ccaatgctct tgttcacaca
      481 cttctcttgg cttgcctatc tcactttaga aacaatacca tcccacacta cttttgtgac
      541 ctctctgcct tgctgaagct gtctagctca gacaccacag tcaatgagat ggccatcctc
      601 cttttaggta tagtggtcat taccctgcca ttcatatgca ttctggtctc ttatgttcat
      661 attggagtca ctatcctgaa ggccccctcc atcaggggaa tctgcaaagc cttgtctaca
      721 tgtggttccc atctctgtgt agtttctttg tactatggag ccattattgg gctataccta
      781 gttccctcat ataataacaa caataacaag gatgtcattg tgtctgtgat gtatggtctg
      841 gtcacaccca tgctcaatcc ctttatctat agtctgagga atcgagacat gaaaggagcg
      901 ctgagaaata tcctcaacag aacaaaataa
//
