LOCUS       NM_001000969             939 bp    mRNA    linear   ROD 26-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 1 subfamily J member 21
            (Or1j21), mRNA.
ACCESSION   NM_001000969
VERSION     NM_001000969.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 939)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000003.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-939               JAXUCZ010000003.1  40737424-40738362
FEATURES             Location/Qualifiers
     source          1..939
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3p11"
     gene            1..939
                     /gene="Or1j21"
                     /gene_synonym="Olr410"
                     /note="olfactory receptor family 1 subfamily J member 21"
                     /db_xref="GeneID:405322"
                     /db_xref="RGD:1333914"
     CDS             1..939
                     /gene="Or1j21"
                     /gene_synonym="Olr410"
                     /note="olfactory receptor gene Olr410; olfactory receptor
                     410"
                     /codon_start=1
                     /product="olfactory receptor Olr410"
                     /protein_id="NP_001000969.1"
                     /db_xref="GeneID:405322"
                     /db_xref="RGD:1333914"
                     /translation="MMETNQSTVSEFILLGLPIQPEDQAVYSVLFLAMYMTTVLGNLL
                     IILLIRLDSHLHTPMYFFLSHLAFTDISFSSVTAPKMLMNMLTHSQSISYAGCVSQIY
                     FFLLFGCIDNFLLTSMAYDRYVAICHPLHYTTVMSQSLCVLLVMISWVFSSTNGLVHT
                     LLFARLSHFKDNTVHHFFCDLSALLKLSISDTTINELVILTLAVVVITVPFICILISY
                     GHIGATILRTPTIQGICKALSTCGSHLCVVFLYYGAIIGLYFFPSSNNTNAKDVIASV
                     LYTVVTPMLNPFIYSLRNRDMKGALKNTLSRRLCSH"
     exon            1..939
                     /gene="Or1j21"
                     /gene_synonym="Olr410"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgatggaga caaatcagag tactgtgtct gaattcatcc tcctagggct ccccatccag
       61 ccagaggacc aagctgtgta ttctgtcctg ttcctggcca tgtacatgac aactgtgcta
      121 gggaacttgc tcattatcct gctcatcagg ttggactctc acctccacac ccccatgtac
      181 ttcttcctca gccacttggc cttcacagac atctcttttt catcagtcac agctccaaag
      241 atgctcatga atatgctgac acacagtcag tctatctcat atgctggatg tgtttcacaa
      301 atatattttt tcttattgtt tgggtgtatt gacaacttcc ttctgacttc catggcctat
      361 gataggtatg tggccatctg ccaccctctg cattacacca ccgttatgag tcagagtctc
      421 tgtgttctgc tagtgatgat atcctgggtc ttttcctcta ctaatggcct tgtgcacact
      481 cttctcttcg ctcgcctctc tcattttaaa gacaacactg tccatcattt tttctgtgat
      541 ctctctgcct tgctcaaact ttccatctca gacacaacca tcaatgaact agtcatcctc
      601 acattagcag tggtggtcat tactgtacca ttcatatgca tcctgatttc ttatggtcac
      661 ataggggcca ctatcctaag aactccaacc atccagggta tctgcaaagc cttgtccaca
      721 tgtggctctc atctctgtgt agttttttta tattatggag ccattattgg gttatatttc
      781 tttccctctt ccaacaatac gaatgctaaa gatgtaatag catctgtgct gtacactgtg
      841 gtcacaccca tgctgaatcc ctttatttat agtctgagga atcgagatat gaaaggagca
      901 ctgaaaaata cactcagcag gcgactgtgt tcacactga
//
