LOCUS       NM_001000380             930 bp    mRNA    linear   ROD 26-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 1 subfamily J member
            16B (Or1j16b), mRNA.
ACCESSION   NM_001000380 XM_231183
VERSION     NM_001000380.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 930)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000003.1.
            
            On Aug 30, 2004 this sequence version replaced XM_231183.2.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-930               JAXUCZ010000003.1  40201712-40202641
FEATURES             Location/Qualifiers
     source          1..930
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3p11"
     gene            1..930
                     /gene="Or1j16b"
                     /gene_synonym="Olr397"
                     /note="olfactory receptor family 1 subfamily J member 16B"
                     /db_xref="GeneID:296663"
                     /db_xref="RGD:1334157"
     CDS             1..930
                     /gene="Or1j16b"
                     /gene_synonym="Olr397"
                     /note="olfactory receptor gene Olr397; olfactory receptor
                     397"
                     /codon_start=1
                     /product="olfactory receptor Olr397"
                     /protein_id="NP_001000380.1"
                     /db_xref="GeneID:296663"
                     /db_xref="RGD:1334157"
                     /translation="MRRDNESTVSEFILLGLPIPVEDQAAYSALFFAVYLTTVLGNLL
                     IILLIRLDSHLHTPMYFFLSHLAFTDISFSSVTAPKMLMNMLTNSHSISYTGCISQVY
                     FFLFFGSIDSFLLTSMAYDRYVAICHPLHYTRIMNQNLCVLLVIVSWILSNACGLVHT
                     LLLTRLSHFRDNTIPHYFCDLSALLKLSSSDTTINELVILPVGTVVITVPFICILVSY
                     GHIGVTILKTPSIKGICKALSTCGSHLCVVSLYYGAIIGLYLVPSYNNTNDKDAIVAV
                     MYSLVTPMLNPFIYSLRNRDMKGALRNILSRTK"
     exon            1..930
                     /gene="Or1j16b"
                     /gene_synonym="Olr397"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgaggaggg acaatgagag cactgtgtct gagttcatcc tcctgggcct tcccattcca
       61 gtagaggacc aagctgcata ctctgccctg ttctttgccg tgtacttgac aactgtgctg
      121 gggaacctgc tcatcatcct gctcatcagg ctggattctc accttcacac ccccatgtac
      181 ttcttcctca gtcatttggc cttcacagac atctctttct catcagttac agctccaaag
      241 atgctcatga atatgctgac aaatagtcac tccatctcat atactgggtg catttcccag
      301 gtttattttt tcttattttt tggaagcatt gacagctttc ttttgacctc catggcctat
      361 gacagatatg tggccatatg ccaccctctg cactacacta ggatcatgaa tcagaacctc
      421 tgtgtcctat tagtaattgt gtcctggatc ttgtctaatg cctgtggcct tgtacatacc
      481 cttctcttga ctcgtctatc tcattttaga gataatacaa tcccccacta cttctgtgat
      541 ctctctgcct tgctgaagct gtccagctca gacaccacca tcaatgaact ggtcatcctt
      601 cctgtaggta cggtggtcat taccgtgcca ttcatatgca ttttggtctc ttatggtcac
      661 attggagtca ccatcctgaa aactccctcc atcaagggaa tctgcaaagc cttgtctaca
      721 tgtggttctc atctctgtgt agtttctttg tactatggag ccattattgg cctttacctg
      781 gtcccttcat ataataacac taatgacaag gatgccattg tggctgtgat gtatagcctg
      841 gtcacaccca tgctgaatcc ctttatctat agtctgagaa atcgagatat gaaaggagcg
      901 ctgagaaata tcctcagcag aacaaaatga
//
