LOCUS       NM_001000559             939 bp    mRNA    linear   ROD 26-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 1 subfamily J member
            13B (Or1j13b), mRNA.
ACCESSION   NM_001000559 XM_345343
VERSION     NM_001000559.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 939)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000003.1.
            
            On Aug 30, 2004 this sequence version replaced XM_345343.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-939               JAXUCZ010000003.1  40109643-40110581
FEATURES             Location/Qualifiers
     source          1..939
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3p11"
     gene            1..939
                     /gene="Or1j13b"
                     /gene_synonym="Olr395; ratchr3-15369055-15369993_ORF"
                     /note="olfactory receptor family 1 subfamily J member 13B"
                     /db_xref="GeneID:366024"
                     /db_xref="RGD:1332916"
     CDS             1..939
                     /gene="Or1j13b"
                     /gene_synonym="Olr395; ratchr3-15369055-15369993_ORF"
                     /note="olfactory receptor gene Olr395; olfactory receptor
                     395"
                     /codon_start=1
                     /product="olfactory receptor Olr395"
                     /protein_id="NP_001000559.1"
                     /db_xref="GeneID:366024"
                     /db_xref="RGD:1332916"
                     /translation="MRMDNDSTMSEFILLGLPIKPEEQGMYSALFLAMYLITVLGNLL
                     IILLIRLDSHLHTPMYFFLSHLAFTDMSFSSVTASKMLMNMLTHSQSISYAGCVSQVY
                     FFSIFADIDSFLLTSMAYDRYVAICHPLHYITIMSQNLCVLLVVVSWALSSANTLVHT
                     LLFARLSHFRNNTIPHYFCEISALLELSISDTTINELVILPLGTVIITVQFICILVSY
                     GRIGATVLRTPSIKGICKALSTCGSHLSVVSLYYGAIIGLYFVPSSNNTNDKDVILSV
                     IYSLVIPMLNPFIYSLRNRDIKGALRNIFSRKLCLQ"
     exon            1..939
                     /gene="Or1j13b"
                     /gene_synonym="Olr395; ratchr3-15369055-15369993_ORF"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgaggatgg ataatgatag cactatgtct gagttcatcc tcctggggct ccccatcaag
       61 ccagaagaac aaggcatgta ctctgccctc ttcctggcca tgtacctgat aactgtgctg
      121 gggaacctgc tcatcatcct gctcatcagg ctggactctc acctccacac ccccatgtac
      181 ttcttcctca gtcacttggc cttcacagac atgtctttct catcagtcac agcttcaaag
      241 atgctcatga atatgctaac acacagtcaa tccatctcat atgctgggtg tgtttcccag
      301 gtatatttct tttcaatttt tgctgatatc gacagctttc ttctcacatc catggcctat
      361 gataggtatg tggccatctg ccaccctctg cactatatca ccatcatgag tcagaacctc
      421 tgtgtccttc tagtagttgt atcctgggcc ctatcatccg ctaacaccct tgtgcacacc
      481 cttctctttg ctcgactatc ccactttaga aacaatacca tcccccacta cttctgtgaa
      541 atctctgcct tgctagagct gtccatctct gacaccacca tcaatgagct tgtcatcctt
      601 cctttaggta cagtgatcat taccgtgcaa ttcatatgca ttctggtctc ttacggccga
      661 attggagcca ctgtcctgag aactccttct atcaagggaa tctgcaaagc cttgtccaca
      721 tgtggttctc acctctctgt tgtctctctg tactatggag ccattattgg gctatatttt
      781 gtcccctcat ctaataacac taatgacaag gatgtcattt tgtctgtgat atatagcttg
      841 gtcataccca tgctgaatcc ctttatctat agtcttagga atagggatat taaaggagct
      901 ctgagaaata tcttcagcag aaaactgtgt ttacagtaa
//
