LOCUS       NM_001000829             939 bp    mRNA    linear   ROD 24-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 1 subfamily J member 13
            (Or1j13), mRNA.
ACCESSION   NM_001000829
VERSION     NM_001000829.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 939)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000003.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-939               JAXUCZ010000003.1  40343463-40344401
FEATURES             Location/Qualifiers
     source          1..939
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3p11"
     gene            1..939
                     /gene="Or1j13"
                     /gene_synonym="Olr401"
                     /note="olfactory receptor family 1 subfamily J member 13"
                     /db_xref="GeneID:405118"
                     /db_xref="RGD:1333467"
     CDS             1..939
                     /gene="Or1j13"
                     /gene_synonym="Olr401"
                     /note="olfactory receptor gene Olr401; olfactory receptor
                     401"
                     /codon_start=1
                     /product="olfactory receptor Olr401"
                     /protein_id="NP_001000829.1"
                     /db_xref="GeneID:405118"
                     /db_xref="RGD:1333467"
                     /translation="MRMDNESTVSEFILLGLPIRAEDQAVYSALFLTMYLTTVLGNLL
                     IILLIRLDSHLHTPMYFFLSHLAFTDISFSSVTAPKMLMNMLTHSQSISYAGCVSQVY
                     FFSTFTDLDSFLLTSMAYDRYVAICHPLHYTTIMSQNLRVLLVVVSWALSSANALVHT
                     LLLARLSHFRNNIIPHYFCEPSALLNLSSSDTTVNEMVILPLGTLVITLPFICILVSY
                     GRIGVTILRTPSIKGICKALSTCGSHLSVVCLYYGAIIGLYLVPSSNNTNDKDVIVAV
                     IYSLVTPMVNPFIYSLRNRDIKGALKNILSRRLCSQ"
     exon            1..939
                     /gene="Or1j13"
                     /gene_synonym="Olr401"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgaggatgg ataatgagag cacagtgtct gagtttatcc tcctagggct ccccattcga
       61 gcagaagacc aagctgtgta ctctgccctg ttcctgacca tgtacctgac aactgtgctg
      121 gggaacctgc tcatcatcct gctcatcagg ctggactctc acctccacac tcccatgtac
      181 ttcttcctta gtcacttggc cttcacagac atctcattct catcagtcac agctccaaag
      241 atgctcatga atatgctaac acacagtcag tctatctcat atgctggttg tgtttcccag
      301 gtatattttt tttcaacttt tactgatctt gacagctttc ttctgacttc catggcatat
      361 gacagatatg tggcaatctg ccacccgctt cactatacca ccatcatgag tcaaaaccta
      421 cgtgtccttt tagtagttgt gtcctgggcc ttatcctctg ccaatgcact tgtgcacacc
      481 cttctcttgg ctcgcctatc tcattttaga aataatatca tcccccacta cttttgtgaa
      541 ccctctgcct tattgaacct gtccagctca gacacgactg tcaatgagat ggtcatcctt
      601 cctttaggta ctctagtcat taccctgcca ttcatatgca tcctggtctc ttatggccga
      661 attggtgtca ccattctgag aactccttcc atcaagggaa tctgcaaagc cttgtccaca
      721 tgtggctctc acctttctgt ggtttgtctg tactatggag ccattattgg gctatatcta
      781 gttccctcat ctaataacac taatgacaag gatgtcattg tggctgtgat atatagcctg
      841 gtcacaccca tggtgaatcc ctttatctat agtctgagga atcgggatat aaaaggagca
      901 ttgaaaaata tcctcagcag gagactgtgt tcacagtga
//
