LOCUS       NM_001000828             939 bp    mRNA    linear   ROD 24-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 1 subfamily J member 12
            (Or1j12), mRNA.
ACCESSION   NM_001000828
VERSION     NM_001000828.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 939)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000003.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-939               JAXUCZ010000003.1  40660565-40661503
FEATURES             Location/Qualifiers
     source          1..939
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3p11"
     gene            1..939
                     /gene="Or1j12"
                     /gene_synonym="Olr407"
                     /note="olfactory receptor family 1 subfamily J member 12"
                     /db_xref="GeneID:405117"
                     /db_xref="RGD:1332629"
     CDS             1..939
                     /gene="Or1j12"
                     /gene_synonym="Olr407"
                     /note="olfactory receptor gene Olr407; olfactory receptor
                     1J4-like; olfactory receptor 407"
                     /codon_start=1
                     /product="olfactory receptor Olr407"
                     /protein_id="NP_001000828.1"
                     /db_xref="GeneID:405117"
                     /db_xref="RGD:1332629"
                     /translation="MRRDNESIVYEFILLGLPIRAENQGMYSVLFLIMYLTTLLANLL
                     IIVLIKLNSHLHTPMYFFLSHLAFTDISFASVASPKMVINMLTHSQSISYAGCITQVY
                     FFSVFAVLDSFLLTSMAYDRYVAICHPLQYSQIMNENLCVLLVVVSWALSTANSLVHT
                     LLFAQLTHFRENIIPHYFCDLSTLLKHSTSDTTINELVILVLGNVVITLPFICILVSY
                     GHIGVTILKTPSIKGIYKALSTCGSHICVVSLYYGAIIGLYFVPSSNNTNDKDVIVAM
                     MYTVVIPMVNPFIYSLRNRDMKGAIRNIFSRRLCSQ"
     exon            1..939
                     /gene="Or1j12"
                     /gene_synonym="Olr407"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgaggagag ataatgagag cattgtctat gagtttatcc tcttggggct ccccattcga
       61 gcagaaaacc aaggcatgta ctctgtcctg ttcctgatca tgtacctgac cacattgctg
      121 gcaaacctgc taatcattgt gctcatcaag ctgaactctc acctacacac ccccatgtac
      181 ttttttctta gccacttggc cttcacagac atctcttttg catcagttgc atctccaaaa
      241 atggttataa atatgctgac gcacagtcag tccatctcat atgctggatg cattacccag
      301 gtatatttct tttcagtttt tgctgttctt gacagctttc ttctgacatc aatggcctat
      361 gacaggtatg tggccatctg ccaccctctg caatattcac aaattatgaa tgagaacctc
      421 tgtgttcttc tagtagtagt ttcctgggcc ttatctactg ccaattccct tgtgcatact
      481 cttctctttg ctcaactgac tcactttaga gaaaatatca ttccccacta cttctgtgac
      541 ctgtctacct tgctgaagca ttctacctca gacactacca tcaatgagct ggtcattctt
      601 gttttaggta atgtggtcat caccctgcca ttcatatgca ttctggtctc ttatgggcac
      661 attggagtca ccattctgaa aactccctca atcaaaggaa tctacaaagc cttgtccaca
      721 tgtgggtctc acatctgtgt ggtttccttg tactatggag ccatcattgg attatatttt
      781 gtcccctcat ctaataacac taatgacaag gatgtcattg tggctatgat gtacactgtg
      841 gtcataccca tggtgaatcc ctttatttat agtctgagga atcgagatat gaaaggagca
      901 attagaaata tcttcagcag gagactttgt tcacaatga
//
