LOCUS       NM_001000719             939 bp    mRNA    linear   ROD 24-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 1 subfamily E member 27
            (Or1e27), mRNA.
ACCESSION   NM_001000719
VERSION     NM_001000719.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 939)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 939)
  AUTHORS   Gibbs,R.A., Weinstock,G.M., Metzker,M.L., Muzny,D.M.,
            Sodergren,E.J., Scherer,S., Scott,G., Steffen,D., Worley,K.C.,
            Burch,P.E., Okwuonu,G., Hines,S., Lewis,L., DeRamo,C., Delgado,O.,
            Dugan-Rocha,S., Miner,G., Morgan,M., Hawes,A., Gill,R., Celera,
            Holt,R.A., Adams,M.D., Amanatides,P.G., Baden-Tillson,H.,
            Barnstead,M., Chin,S., Evans,C.A., Ferriera,S., Fosler,C.,
            Glodek,A., Gu,Z., Jennings,D., Kraft,C.L., Nguyen,T.,
            Pfannkoch,C.M., Sitter,C., Sutton,G.G., Venter,J.C., Woodage,T.,
            Smith,D., Lee,H.M., Gustafson,E., Cahill,P., Kana,A.,
            Doucette-Stamm,L., Weinstock,K., Fechtel,K., Weiss,R.B., Dunn,D.M.,
            Green,E.D., Blakesley,R.W., Bouffard,G.G., De Jong,P.J.,
            Osoegawa,K., Zhu,B., Marra,M., Schein,J., Bosdet,I., Fjell,C.,
            Jones,S., Krzywinski,M., Mathewson,C., Siddiqui,A., Wye,N.,
            McPherson,J., Zhao,S., Fraser,C.M., Shetty,J., Shatsman,S.,
            Geer,K., Chen,Y., Abramzon,S., Nierman,W.C., Havlak,P.H., Chen,R.,
            Durbin,K.J., Simons,R., Ren,Y., Song,X.Z., Li,B., Liu,Y., Qin,X.,
            Cawley,S., Worley,K.C., Cooney,A.J., D'Souza,L.M., Martin,K.,
            Wu,J.Q., Gonzalez-Garay,M.L., Jackson,A.R., Kalafus,K.J.,
            McLeod,M.P., Milosavljevic,A., Virk,D., Volkov,A., Wheeler,D.A.,
            Zhang,Z., Bailey,J.A., Eichler,E.E., Tuzun,E., Birney,E.,
            Mongin,E., Ureta-Vidal,A., Woodwark,C., Zdobnov,E., Bork,P.,
            Suyama,M., Torrents,D., Alexandersson,M., Trask,B.J., Young,J.M.,
            Huang,H., Wang,H., Xing,H., Daniels,S., Gietzen,D., Schmidt,J.,
            Stevens,K., Vitt,U., Wingrove,J., Camara,F., Mar Alba,M.,
            Abril,J.F., Guigo,R., Smit,A., Dubchak,I., Rubin,E.M., Couronne,O.,
            Poliakov,A., Hubner,N., Ganten,D., Goesele,C., Hummel,O.,
            Kreitler,T., Lee,Y.A., Monti,J., Schulz,H., Zimdahl,H.,
            Himmelbauer,H., Lehrach,H., Jacob,H.J., Bromberg,S.,
            Gullings-Handley,J., Jensen-Seaman,M.I., Kwitek,A.E., Lazar,J.,
            Pasko,D., Tonellato,P.J., Twigger,S., Ponting,C.P., Duarte,J.M.,
            Rice,S., Goodstadt,L., Beatson,S.A., Emes,R.D., Winter,E.E.,
            Webber,C., Brandt,P., Nyakatura,G., Adetobi,M., Chiaromonte,F.,
            Elnitski,L., Eswara,P., Hardison,R.C., Hou,M., Kolbe,D., Makova,K.,
            Miller,W., Nekrutenko,A., Riemer,C., Schwartz,S., Taylor,J.,
            Yang,S., Zhang,Y., Lindpaintner,K., Andrews,T.D., Caccamo,M.,
            Clamp,M., Clarke,L., Curwen,V., Durbin,R., Eyras,E., Searle,S.M.,
            Cooper,G.M., Batzoglou,S., Brudno,M., Sidow,A., Stone,E.A.,
            Venter,J.C., Payseur,B.A., Bourque,G., Lopez-Otin,C., Puente,X.S.,
            Chakrabarti,K., Chatterji,S., Dewey,C., Pachter,L., Bray,N.,
            Yap,V.B., Caspi,A., Tesler,G., Pevzner,P.A., Haussler,D.,
            Roskin,K.M., Baertsch,R., Clawson,H., Furey,T.S., Hinrichs,A.S.,
            Karolchik,D., Kent,W.J., Rosenbloom,K.R., Trumbower,H.,
            Weirauch,M., Cooper,D.N., Stenson,P.D., Ma,B., Brent,M.,
            Arumugam,M., Shteynberg,D., Copley,R.R., Taylor,M.S., Riethman,H.,
            Mudunuri,U., Peterson,J., Guyer,M., Felsenfeld,A., Old,S.,
            Mockrin,S. and Collins,F.
  CONSRTM   Rat Genome Sequencing Project Consortium
  TITLE     Genome sequence of the Brown Norway rat yields insights into
            mammalian evolution
  JOURNAL   Nature 428 (6982), 493-521 (2004)
   PUBMED   15057822
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000010.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-939               JAXUCZ010000010.1  58904833-58905771
FEATURES             Location/Qualifiers
     source          1..939
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q24"
     gene            1..939
                     /gene="Or1e27"
                     /gene_synonym="Olr1488"
                     /note="olfactory receptor family 1 subfamily E member 27"
                     /db_xref="GeneID:404971"
                     /db_xref="RGD:1333517"
     CDS             1..939
                     /gene="Or1e27"
                     /gene_synonym="Olr1488"
                     /note="olfactory receptor gene Olr1488; olfactory receptor
                     1488"
                     /codon_start=1
                     /product="olfactory receptor Olr1488"
                     /protein_id="NP_001000719.1"
                     /db_xref="GeneID:404971"
                     /db_xref="RGD:1333517"
                     /translation="MIMNNQTLISQFLLLGLPIPPENQHLFYALFLAIYLTTILGNFI
                     IITLICLDSHLHTPMYFFLSNLSLTDLCFSSVTMPKLLQNMQSQDTSISYAGCLAQMY
                     FFMVFANMENVLLVVMAYDRYVAICFPLRYTSIMSSKLCVSLVVLSWVFTILYSMLHT
                     LLLARLSFCEDNVIPHFFCDITALLKLACSDIYINELMIFILGGFDIVIPFLLIVVSY
                     VQIVCSILKFSTTRGIHKVFSTCGSHLSVVSLFYGTIIGVYICPSANNSTVKETAMAL
                     MYTVVTPMLNPFIYSLRNRDMKGALIRVLCKKQISL"
     exon            1..939
                     /gene="Or1e27"
                     /gene_synonym="Olr1488"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgataatga ataaccagac cctcatctct cagttcctcc tcctgggcct gcccattcct
       61 ccagagaacc agcatctgtt ctatgccctg ttcctggcca tatacctcac caccatcctg
      121 gggaatttca tcatcatcac cctcatttgt ctggattccc atctccacac acccatgtac
      181 ttttttctca gcaacttgtc cctcactgac ctttgctttt cttctgtcac aatgcctaaa
      241 ctgctgcaga acatgcagag ccaggacaca tctatctcct atgctggctg tctggcacaa
      301 atgtactttt ttatggtttt tgcaaacatg gagaatgttc ttcttgtggt catggcctat
      361 gaccgctatg tggccatctg cttccctctt cgttatacca gcatcatgag ctccaagctt
      421 tgtgtgtctc tagtggtgct ctcctgggta tttaccattc tgtattctat gttgcacacc
      481 ttactcttgg caagattgtc attctgtgag gacaatgtga tcccccattt tttctgtgac
      541 ataactgccc tgctcaagtt ggcatgctct gacatttata ttaatgaact aatgatattt
      601 atcttgggag ggtttgatat tgtgatccca ttcttactca ttgttgtttc atatgtacaa
      661 attgtctgct ccattctaaa gttttcaact acacggggca tacacaaggt cttttccacc
      721 tgtggctccc acctttctgt ggtctcactg ttctatggga caattattgg tgtctatata
      781 tgtccatcag ctaataactc tactgtgaag gagacggcca tggccctgat gtacacagtg
      841 gtgactccca tgctgaatcc ctttatctac agcctgagaa acagagatat gaagggggcc
      901 ctgatcagag tcctttgcaa gaagcaaatt tcattataa
//
