LOCUS       NM_001000717             939 bp    mRNA    linear   ROD 26-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 1 subfamily E member 25
            (Or1e25), mRNA.
ACCESSION   NM_001000717 XM_001080405
VERSION     NM_001000717.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 939)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 939)
  AUTHORS   Gibbs,R.A., Weinstock,G.M., Metzker,M.L., Muzny,D.M.,
            Sodergren,E.J., Scherer,S., Scott,G., Steffen,D., Worley,K.C.,
            Burch,P.E., Okwuonu,G., Hines,S., Lewis,L., DeRamo,C., Delgado,O.,
            Dugan-Rocha,S., Miner,G., Morgan,M., Hawes,A., Gill,R., Celera,
            Holt,R.A., Adams,M.D., Amanatides,P.G., Baden-Tillson,H.,
            Barnstead,M., Chin,S., Evans,C.A., Ferriera,S., Fosler,C.,
            Glodek,A., Gu,Z., Jennings,D., Kraft,C.L., Nguyen,T.,
            Pfannkoch,C.M., Sitter,C., Sutton,G.G., Venter,J.C., Woodage,T.,
            Smith,D., Lee,H.M., Gustafson,E., Cahill,P., Kana,A.,
            Doucette-Stamm,L., Weinstock,K., Fechtel,K., Weiss,R.B., Dunn,D.M.,
            Green,E.D., Blakesley,R.W., Bouffard,G.G., De Jong,P.J.,
            Osoegawa,K., Zhu,B., Marra,M., Schein,J., Bosdet,I., Fjell,C.,
            Jones,S., Krzywinski,M., Mathewson,C., Siddiqui,A., Wye,N.,
            McPherson,J., Zhao,S., Fraser,C.M., Shetty,J., Shatsman,S.,
            Geer,K., Chen,Y., Abramzon,S., Nierman,W.C., Havlak,P.H., Chen,R.,
            Durbin,K.J., Simons,R., Ren,Y., Song,X.Z., Li,B., Liu,Y., Qin,X.,
            Cawley,S., Worley,K.C., Cooney,A.J., D'Souza,L.M., Martin,K.,
            Wu,J.Q., Gonzalez-Garay,M.L., Jackson,A.R., Kalafus,K.J.,
            McLeod,M.P., Milosavljevic,A., Virk,D., Volkov,A., Wheeler,D.A.,
            Zhang,Z., Bailey,J.A., Eichler,E.E., Tuzun,E., Birney,E.,
            Mongin,E., Ureta-Vidal,A., Woodwark,C., Zdobnov,E., Bork,P.,
            Suyama,M., Torrents,D., Alexandersson,M., Trask,B.J., Young,J.M.,
            Huang,H., Wang,H., Xing,H., Daniels,S., Gietzen,D., Schmidt,J.,
            Stevens,K., Vitt,U., Wingrove,J., Camara,F., Mar Alba,M.,
            Abril,J.F., Guigo,R., Smit,A., Dubchak,I., Rubin,E.M., Couronne,O.,
            Poliakov,A., Hubner,N., Ganten,D., Goesele,C., Hummel,O.,
            Kreitler,T., Lee,Y.A., Monti,J., Schulz,H., Zimdahl,H.,
            Himmelbauer,H., Lehrach,H., Jacob,H.J., Bromberg,S.,
            Gullings-Handley,J., Jensen-Seaman,M.I., Kwitek,A.E., Lazar,J.,
            Pasko,D., Tonellato,P.J., Twigger,S., Ponting,C.P., Duarte,J.M.,
            Rice,S., Goodstadt,L., Beatson,S.A., Emes,R.D., Winter,E.E.,
            Webber,C., Brandt,P., Nyakatura,G., Adetobi,M., Chiaromonte,F.,
            Elnitski,L., Eswara,P., Hardison,R.C., Hou,M., Kolbe,D., Makova,K.,
            Miller,W., Nekrutenko,A., Riemer,C., Schwartz,S., Taylor,J.,
            Yang,S., Zhang,Y., Lindpaintner,K., Andrews,T.D., Caccamo,M.,
            Clamp,M., Clarke,L., Curwen,V., Durbin,R., Eyras,E., Searle,S.M.,
            Cooper,G.M., Batzoglou,S., Brudno,M., Sidow,A., Stone,E.A.,
            Venter,J.C., Payseur,B.A., Bourque,G., Lopez-Otin,C., Puente,X.S.,
            Chakrabarti,K., Chatterji,S., Dewey,C., Pachter,L., Bray,N.,
            Yap,V.B., Caspi,A., Tesler,G., Pevzner,P.A., Haussler,D.,
            Roskin,K.M., Baertsch,R., Clawson,H., Furey,T.S., Hinrichs,A.S.,
            Karolchik,D., Kent,W.J., Rosenbloom,K.R., Trumbower,H.,
            Weirauch,M., Cooper,D.N., Stenson,P.D., Ma,B., Brent,M.,
            Arumugam,M., Shteynberg,D., Copley,R.R., Taylor,M.S., Riethman,H.,
            Mudunuri,U., Peterson,J., Guyer,M., Felsenfeld,A., Old,S.,
            Mockrin,S. and Collins,F.
  CONSRTM   Rat Genome Sequencing Project Consortium
  TITLE     Genome sequence of the Brown Norway rat yields insights into
            mammalian evolution
  JOURNAL   Nature 428 (6982), 493-521 (2004)
   PUBMED   15057822
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000010.1.
            
            On Jun 25, 2006 this sequence version replaced XM_001080405.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-939               JAXUCZ010000010.1  58944825-58945763   c
FEATURES             Location/Qualifiers
     source          1..939
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q24"
     gene            1..939
                     /gene="Or1e25"
                     /gene_synonym="Olr1491"
                     /note="olfactory receptor family 1 subfamily E member 25"
                     /db_xref="GeneID:404969"
                     /db_xref="RGD:1333854"
     CDS             1..939
                     /gene="Or1e25"
                     /gene_synonym="Olr1491"
                     /note="olfactory receptor 1491; olfactory receptor gene
                     Olr1491"
                     /codon_start=1
                     /product="olfactory receptor Olr1491"
                     /protein_id="NP_001000717.1"
                     /db_xref="GeneID:404969"
                     /db_xref="RGD:1333854"
                     /translation="MVMDNQSVITQFLLLGLPIAPKHQHLFYALFLAMHLTTILGNLI
                     IIILIILDSHLHTLMYMFLNNLSFSDLCFSSVTMPKLLQNMQSQDTSISYAGCLTQMY
                     FFMVFADMENFLLVVMAYDRYVAICFPLHYMSIMSTKLCVYVVVLFWALTVFYSMLHT
                     LLMARLSFCEDNVIAHFFCDISALLKLACSDIYINELLIFILGGFVVVIPFLLIVVSY
                     VQILSSILKLSSTQGIRKVFSTCGSHLCVVSLFYGTIIGLYLCPSANNSTMKVASMSL
                     MYTVVTPMLNPFIYSLRNRDIKDALIRVLCKKKITM"
     exon            1..939
                     /gene="Or1e25"
                     /gene_synonym="Olr1491"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atggtaatgg acaaccaatc tgttatcacc cagttcctcc tcttgggact tcccattgcc
       61 ccgaagcacc agcatctgtt ctatgccctg ttcctggcca tgcacctcac caccatcctg
      121 ggaaacctca tcatcatcat cctcattata ctggactccc atctccacac actcatgtac
      181 atgtttctca acaacttgtc cttctctgat ctctgctttt cctctgtcac aatgcctaag
      241 ttgctgcaga acatgcagag tcaggacaca tctatctcct atgctggctg tctgacacaa
      301 atgtactttt tcatggtctt tgcagacatg gagaactttc ttcttgtggt catggcctat
      361 gaccgctatg tggccatctg cttccccctt cattacatga gcatcatgag caccaagctc
      421 tgtgtgtatg tggtggtact gttctgggca cttactgtgt tttactccat gttacacacc
      481 ctactcatgg ctagattgtc gttctgtgag gacaatgtga tcgcccattt tttctgtgac
      541 atatctgccc tgcttaaatt ggcctgctct gatatttata ttaatgaact attgatattt
      601 atcttaggag ggtttgttgt tgtcatccct ttcttactca ttgttgtgtc ctatgtacaa
      661 attctctctt ccatcctaaa gttgtcatct actcagggta tacgcaaggt cttctccact
      721 tgtggctccc acctgtgtgt ggtctcactg ttctatggga caattattgg tctgtattta
      781 tgtccatcag ctaataactc tacaatgaaa gtggcttcca tgtccctgat gtacacagtg
      841 gtgactccca tgctgaatcc tttcatctac agcctgagga acagagatat taaagatgcc
      901 ctgataagag tcctttgcaa gaaaaaaatc acaatgtaa
//
