LOCUS       NM_001000024             945 bp    mRNA    linear   ROD 24-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 1 subfamily E member 1
            (Or1e1), mRNA.
ACCESSION   NM_001000024 XM_220652
VERSION     NM_001000024.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 945)
  AUTHORS   Gibbs,R.A., Weinstock,G.M., Metzker,M.L., Muzny,D.M.,
            Sodergren,E.J., Scherer,S., Scott,G., Steffen,D., Worley,K.C.,
            Burch,P.E., Okwuonu,G., Hines,S., Lewis,L., DeRamo,C., Delgado,O.,
            Dugan-Rocha,S., Miner,G., Morgan,M., Hawes,A., Gill,R., Celera,
            Holt,R.A., Adams,M.D., Amanatides,P.G., Baden-Tillson,H.,
            Barnstead,M., Chin,S., Evans,C.A., Ferriera,S., Fosler,C.,
            Glodek,A., Gu,Z., Jennings,D., Kraft,C.L., Nguyen,T.,
            Pfannkoch,C.M., Sitter,C., Sutton,G.G., Venter,J.C., Woodage,T.,
            Smith,D., Lee,H.M., Gustafson,E., Cahill,P., Kana,A.,
            Doucette-Stamm,L., Weinstock,K., Fechtel,K., Weiss,R.B., Dunn,D.M.,
            Green,E.D., Blakesley,R.W., Bouffard,G.G., De Jong,P.J.,
            Osoegawa,K., Zhu,B., Marra,M., Schein,J., Bosdet,I., Fjell,C.,
            Jones,S., Krzywinski,M., Mathewson,C., Siddiqui,A., Wye,N.,
            McPherson,J., Zhao,S., Fraser,C.M., Shetty,J., Shatsman,S.,
            Geer,K., Chen,Y., Abramzon,S., Nierman,W.C., Havlak,P.H., Chen,R.,
            Durbin,K.J., Simons,R., Ren,Y., Song,X.Z., Li,B., Liu,Y., Qin,X.,
            Cawley,S., Worley,K.C., Cooney,A.J., D'Souza,L.M., Martin,K.,
            Wu,J.Q., Gonzalez-Garay,M.L., Jackson,A.R., Kalafus,K.J.,
            McLeod,M.P., Milosavljevic,A., Virk,D., Volkov,A., Wheeler,D.A.,
            Zhang,Z., Bailey,J.A., Eichler,E.E., Tuzun,E., Birney,E.,
            Mongin,E., Ureta-Vidal,A., Woodwark,C., Zdobnov,E., Bork,P.,
            Suyama,M., Torrents,D., Alexandersson,M., Trask,B.J., Young,J.M.,
            Huang,H., Wang,H., Xing,H., Daniels,S., Gietzen,D., Schmidt,J.,
            Stevens,K., Vitt,U., Wingrove,J., Camara,F., Mar Alba,M.,
            Abril,J.F., Guigo,R., Smit,A., Dubchak,I., Rubin,E.M., Couronne,O.,
            Poliakov,A., Hubner,N., Ganten,D., Goesele,C., Hummel,O.,
            Kreitler,T., Lee,Y.A., Monti,J., Schulz,H., Zimdahl,H.,
            Himmelbauer,H., Lehrach,H., Jacob,H.J., Bromberg,S.,
            Gullings-Handley,J., Jensen-Seaman,M.I., Kwitek,A.E., Lazar,J.,
            Pasko,D., Tonellato,P.J., Twigger,S., Ponting,C.P., Duarte,J.M.,
            Rice,S., Goodstadt,L., Beatson,S.A., Emes,R.D., Winter,E.E.,
            Webber,C., Brandt,P., Nyakatura,G., Adetobi,M., Chiaromonte,F.,
            Elnitski,L., Eswara,P., Hardison,R.C., Hou,M., Kolbe,D., Makova,K.,
            Miller,W., Nekrutenko,A., Riemer,C., Schwartz,S., Taylor,J.,
            Yang,S., Zhang,Y., Lindpaintner,K., Andrews,T.D., Caccamo,M.,
            Clamp,M., Clarke,L., Curwen,V., Durbin,R., Eyras,E., Searle,S.M.,
            Cooper,G.M., Batzoglou,S., Brudno,M., Sidow,A., Stone,E.A.,
            Venter,J.C., Payseur,B.A., Bourque,G., Lopez-Otin,C., Puente,X.S.,
            Chakrabarti,K., Chatterji,S., Dewey,C., Pachter,L., Bray,N.,
            Yap,V.B., Caspi,A., Tesler,G., Pevzner,P.A., Haussler,D.,
            Roskin,K.M., Baertsch,R., Clawson,H., Furey,T.S., Hinrichs,A.S.,
            Karolchik,D., Kent,W.J., Rosenbloom,K.R., Trumbower,H.,
            Weirauch,M., Cooper,D.N., Stenson,P.D., Ma,B., Brent,M.,
            Arumugam,M., Shteynberg,D., Copley,R.R., Taylor,M.S., Riethman,H.,
            Mudunuri,U., Peterson,J., Guyer,M., Felsenfeld,A., Old,S.,
            Mockrin,S. and Collins,F.
  CONSRTM   Rat Genome Sequencing Project Consortium
  TITLE     Genome sequence of the Brown Norway rat yields insights into
            mammalian evolution
  JOURNAL   Nature 428 (6982), 493-521 (2004)
   PUBMED   15057822
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000010.1.
            
            On Aug 30, 2004 this sequence version replaced XM_220652.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-945               JAXUCZ010000010.1  58474010-58474954
FEATURES             Location/Qualifiers
     source          1..945
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q24"
     gene            1..945
                     /gene="Or1e1"
                     /gene_synonym="Olr1466"
                     /note="olfactory receptor family 1 subfamily E member 1"
                     /db_xref="GeneID:287480"
                     /db_xref="RGD:1333989"
     CDS             1..945
                     /gene="Or1e1"
                     /gene_synonym="Olr1466"
                     /note="olfactory receptor gene Olr1466; olfactory receptor
                     1466"
                     /codon_start=1
                     /product="olfactory receptor Olr1466"
                     /protein_id="NP_001000024.1"
                     /db_xref="GeneID:287480"
                     /db_xref="RGD:1333989"
                     /translation="MIEENQTVISQFLLMGLPIPSEHQQLFYALFLSMYLTTVLGNLI
                     IIILICLDSHLHTPMYLFLSNLSFSDLCFSSVTMPKLLQNMQSQDTSILYAGCLTQMY
                     FFLLFGDLESFLLVAMAYDRYVAICFPLHYVSIMSPKLCVSLVVLSWVLTTFHAMLHT
                     LLMARLSFCEDNVIPHFFCDMSALLKLSCSDTHVNELVIFVMGGIILVIPFVLIIVSY
                     VRIVSSILKVPSARGIRKAFSTCGSHLSVVSLFYGTVIGLYLCPSANNSTVKETVMAM
                     MYTVVTPMLNPFIYSLRNRDMKGALNRVICKKKVFFCL"
     exon            1..945
                     /gene="Or1e1"
                     /gene_synonym="Olr1466"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgatagaag agaaccaaac tgtgatctcc cagttccttc tcatgggtct gcccatccct
       61 tcagagcacc agcaactgtt ctacgccctg ttcctgtcca tgtacctcac cactgtcctg
      121 gggaacctca ttatcatcat cctcatttgt ctggattccc atctccacac acccatgtac
      181 ttgtttctca gcaacttgtc cttctctgac ctctgctttt cctctgtcac aatgcccaaa
      241 ttgttgcaga acatgcagag ccaggacaca tccatcctct atgcaggctg cctgacacaa
      301 atgtactttt tcttgctttt tggagatctc gagagcttcc tgcttgtggc catggcctat
      361 gaccgctatg tggccatctg cttccccctt cattacgtga gcatcatgag ccccaagctc
      421 tgtgtgagtc tggtggtgct gtcctgggtg ctgactacct tccatgccat gctgcacacc
      481 ctgctcatgg ccagattgtc attctgtgag gataatgtga tcccccactt tttctgtgac
      541 atgtctgctc tgctgaagct gtcctgctct gacacccatg ttaatgagtt ggtgatattt
      601 gtcatgggag gcatcatcct tgtcattcca tttgtgctca tcattgtgtc ctatgtccga
      661 attgtctcct ccattctcaa ggtcccatct gctcgaggca tccgtaaagc cttctccacc
      721 tgtggctccc acctgtctgt ggtgtcactg ttctatggga cagtcattgg tctgtactta
      781 tgtccatcag ctaataactc tactgtgaag gagactgtca tggccatgat gtacacggtg
      841 gtgactccca tgctgaatcc cttcatctac agcctgagga acagagacat gaagggagca
      901 ctgaacagag ttatttgtaa gaagaaagtt ttcttctgtc tatga
//
