LOCUS       NM_001000395             930 bp    mRNA    linear   ROD 26-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 1 subfamily AF member 1
            (Or1af1), mRNA.
ACCESSION   NM_001000395 XM_231231
VERSION     NM_001000395.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 930)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000003.1.
            
            On Aug 30, 2004 this sequence version replaced XM_231231.2.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-930               JAXUCZ010000003.1  41175417-41176346
FEATURES             Location/Qualifiers
     source          1..930
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3p11"
     gene            1..930
                     /gene="Or1af1"
                     /gene_synonym="Olr429"
                     /note="olfactory receptor family 1 subfamily AF member 1"
                     /db_xref="GeneID:296690"
                     /db_xref="RGD:1333332"
     CDS             1..930
                     /gene="Or1af1"
                     /gene_synonym="Olr429"
                     /note="olfactory receptor gene Olr429; olfactory receptor
                     429"
                     /codon_start=1
                     /product="olfactory receptor Olr429"
                     /protein_id="NP_001000395.1"
                     /db_xref="GeneID:296690"
                     /db_xref="RGD:1333332"
                     /translation="MPQENQSHMTEFLLLGLTSNPKQQVWLFAIFLAMYLVNVIGNSV
                     IIAAIQRDARLHTPMYFFLSNLSLVDICFTTVIVPQMLVNLLTQRKTILFVQCLTQMY
                     FFVAFGITDSFLLAVMAIDRYVAICNPLHYNTTMSPRRCRLLVMTSWAVSHLHSLTHT
                     ILMGRLSFCGPNVIHHFFCDVQPLLTLSCSDTFINELLAFTEGSVVIMSPFIFIVVSY
                     AYITRTVLRVPSGEGRYKVFSTCGSHLTVVALFYGTIISVYIRPSSTYSVTKDRVVTV
                     IYTVITPMLNPFIYSLRNKDMKQALRKLANKTE"
     exon            1..930
                     /gene="Or1af1"
                     /gene_synonym="Olr429"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgccccagg aaaaccagag ccacatgaca gaattcctcc ttttaggact gaccagcaac
       61 cccaaacaac aggtatggct ttttgctatc ttccttgcca tgtatctggt caatgtaatt
      121 ggcaactcag tcatcattgc agccatccag agagatgccc gtctacatac tcctatgtac
      181 ttctttctct ccaacctatc cctggtggac atctgcttta ccactgtcat cgtgccacag
      241 atgttagtga acttgctgac acagagaaag acaatcctct ttgtccagtg cctcactcaa
      301 atgtatttct ttgtggcctt tggtattaca gacagtttcc tcttggctgt gatggccatt
      361 gaccgctatg ttgctatctg caatccactt cattacaaca caaccatgag tcccaggcgc
      421 tgtcgcttgc tggtgatgac atcctgggca gtgtcccatc ttcactccct cacccacaca
      481 attctcatgg gccgcctctc tttctgtgga cccaatgtca ttcatcactt cttttgtgat
      541 gtccaaccac tgttgacact ctcctgctct gacaccttta tcaatgagct tttggccttc
      601 acagagggtt ctgttgttat catgagcccc tttatcttta ttgttgtctc ttatgcctat
      661 attactcgga ctgttctgag agtcccctca ggggaaggaa ggtacaaagt cttctctaca
      721 tgtgggtccc acctcacagt tgtggcactg ttctatggaa ccataatatc agtgtatatt
      781 cgcccctctt ccacctactc agtgacaaag gaccgagtgg tcactgtcat ctatacagta
      841 attaccccca tgctgaatcc tttcatctac agccttagga acaaagacat gaaacaggcc
      901 ttgagaaaat tggctaataa aacagaatag
//
