LOCUS       NM_001000585             948 bp    mRNA    linear   ROD 26-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 13 subfamily P member 5
            (Or13p5), mRNA.
ACCESSION   NM_001000585 XM_345575
VERSION     NM_001000585.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 948)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 948)
  AUTHORS   Gibbs,R.A., Weinstock,G.M., Metzker,M.L., Muzny,D.M.,
            Sodergren,E.J., Scherer,S., Scott,G., Steffen,D., Worley,K.C.,
            Burch,P.E., Okwuonu,G., Hines,S., Lewis,L., DeRamo,C., Delgado,O.,
            Dugan-Rocha,S., Miner,G., Morgan,M., Hawes,A., Gill,R., Celera,
            Holt,R.A., Adams,M.D., Amanatides,P.G., Baden-Tillson,H.,
            Barnstead,M., Chin,S., Evans,C.A., Ferriera,S., Fosler,C.,
            Glodek,A., Gu,Z., Jennings,D., Kraft,C.L., Nguyen,T.,
            Pfannkoch,C.M., Sitter,C., Sutton,G.G., Venter,J.C., Woodage,T.,
            Smith,D., Lee,H.M., Gustafson,E., Cahill,P., Kana,A.,
            Doucette-Stamm,L., Weinstock,K., Fechtel,K., Weiss,R.B., Dunn,D.M.,
            Green,E.D., Blakesley,R.W., Bouffard,G.G., De Jong,P.J.,
            Osoegawa,K., Zhu,B., Marra,M., Schein,J., Bosdet,I., Fjell,C.,
            Jones,S., Krzywinski,M., Mathewson,C., Siddiqui,A., Wye,N.,
            McPherson,J., Zhao,S., Fraser,C.M., Shetty,J., Shatsman,S.,
            Geer,K., Chen,Y., Abramzon,S., Nierman,W.C., Havlak,P.H., Chen,R.,
            Durbin,K.J., Simons,R., Ren,Y., Song,X.Z., Li,B., Liu,Y., Qin,X.,
            Cawley,S., Worley,K.C., Cooney,A.J., D'Souza,L.M., Martin,K.,
            Wu,J.Q., Gonzalez-Garay,M.L., Jackson,A.R., Kalafus,K.J.,
            McLeod,M.P., Milosavljevic,A., Virk,D., Volkov,A., Wheeler,D.A.,
            Zhang,Z., Bailey,J.A., Eichler,E.E., Tuzun,E., Birney,E.,
            Mongin,E., Ureta-Vidal,A., Woodwark,C., Zdobnov,E., Bork,P.,
            Suyama,M., Torrents,D., Alexandersson,M., Trask,B.J., Young,J.M.,
            Huang,H., Wang,H., Xing,H., Daniels,S., Gietzen,D., Schmidt,J.,
            Stevens,K., Vitt,U., Wingrove,J., Camara,F., Mar Alba,M.,
            Abril,J.F., Guigo,R., Smit,A., Dubchak,I., Rubin,E.M., Couronne,O.,
            Poliakov,A., Hubner,N., Ganten,D., Goesele,C., Hummel,O.,
            Kreitler,T., Lee,Y.A., Monti,J., Schulz,H., Zimdahl,H.,
            Himmelbauer,H., Lehrach,H., Jacob,H.J., Bromberg,S.,
            Gullings-Handley,J., Jensen-Seaman,M.I., Kwitek,A.E., Lazar,J.,
            Pasko,D., Tonellato,P.J., Twigger,S., Ponting,C.P., Duarte,J.M.,
            Rice,S., Goodstadt,L., Beatson,S.A., Emes,R.D., Winter,E.E.,
            Webber,C., Brandt,P., Nyakatura,G., Adetobi,M., Chiaromonte,F.,
            Elnitski,L., Eswara,P., Hardison,R.C., Hou,M., Kolbe,D., Makova,K.,
            Miller,W., Nekrutenko,A., Riemer,C., Schwartz,S., Taylor,J.,
            Yang,S., Zhang,Y., Lindpaintner,K., Andrews,T.D., Caccamo,M.,
            Clamp,M., Clarke,L., Curwen,V., Durbin,R., Eyras,E., Searle,S.M.,
            Cooper,G.M., Batzoglou,S., Brudno,M., Sidow,A., Stone,E.A.,
            Venter,J.C., Payseur,B.A., Bourque,G., Lopez-Otin,C., Puente,X.S.,
            Chakrabarti,K., Chatterji,S., Dewey,C., Pachter,L., Bray,N.,
            Yap,V.B., Caspi,A., Tesler,G., Pevzner,P.A., Haussler,D.,
            Roskin,K.M., Baertsch,R., Clawson,H., Furey,T.S., Hinrichs,A.S.,
            Karolchik,D., Kent,W.J., Rosenbloom,K.R., Trumbower,H.,
            Weirauch,M., Cooper,D.N., Stenson,P.D., Ma,B., Brent,M.,
            Arumugam,M., Shteynberg,D., Copley,R.R., Taylor,M.S., Riethman,H.,
            Mudunuri,U., Peterson,J., Guyer,M., Felsenfeld,A., Old,S.,
            Mockrin,S. and Collins,F.
  CONSRTM   Rat Genome Sequencing Project Consortium
  TITLE     Genome sequence of the Brown Norway rat yields insights into
            mammalian evolution
  JOURNAL   Nature 428 (6982), 493-521 (2004)
   PUBMED   15057822
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000005.1.
            
            On Feb 11, 2021 this sequence version replaced NM_001000585.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-948               JAXUCZ010000005.1  137549795-137550742
FEATURES             Location/Qualifiers
     source          1..948
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q36"
     gene            1..948
                     /gene="Or13p5"
                     /gene_synonym="Olr859"
                     /note="olfactory receptor family 13 subfamily P member 5"
                     /db_xref="GeneID:366458"
                     /db_xref="RGD:1333211"
     CDS             1..948
                     /gene="Or13p5"
                     /gene_synonym="Olr859"
                     /note="olfactory receptor gene Olr859; olfactory receptor
                     2G3-like; putative olfactory receptor 2B3-like; olfactory
                     receptor 859"
                     /codon_start=1
                     /product="olfactory receptor Olr859"
                     /protein_id="NP_001000585.2"
                     /db_xref="GeneID:366458"
                     /db_xref="RGD:1333211"
                     /translation="MQGFSYENHSSVSEFILLGFSRNFQINIILFNVFFFLYLSTLVG
                     NGLIVTLIHLDSRLHTPMYFFLSVLSLLDMSYVTTTVPQMLVHLVCQKKTISYSGCVA
                     QMYIFLVLGITEGWLFSVMAYDRYVAICHPLRYKVIMRPWLCGAMVVFCGLWGVSCSL
                     IYTVFTMRLPYCGPNEINHFFCEVPAVLKLACADTSLNDRIDFILGFILLLVPLSFIL
                     ASYVCIFATILRIRSAQGRLKAFSTCASHITVVTMFCGPAMFMYMNPGANASPERDKK
                     LALFYNVISAFLNPIIYSLRNKDVKRAFLKVTGWGGATE"
     exon            1..948
                     /gene="Or13p5"
                     /gene_synonym="Olr859"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgcaaggct tctcctatga gaaccatagc tctgtgtcag agttcatcct tctggggttc
       61 tccaggaatt tccaaattaa tataatcctc ttcaacgtct tcttcttcct ctacctttct
      121 acacttgtgg gcaatggtct cattgtcacc ttgatccacc tggactcccg tctccataca
      181 cccatgtact tcttcctcag tgtcctttcc ctgctggata tgagctatgt caccaccaca
      241 gtgccccaga tgttggtgca tcttgtctgc cagaagaaaa ctatctccta ttctgggtgt
      301 gtggcccaga tgtacatctt tctggtatta ggcatcactg agggctggtt gttctctgtc
      361 atggcctatg atagatatgt agccatttgc cacccactca gatataaggt tatcatgagg
      421 ccttggctgt gtggtgcaat ggtagtcttt tgtggactat ggggtgtcag ctgttctctg
      481 atctacactg tcttcactat gaggctgccc tactgtggcc ccaatgagat caatcacttc
      541 ttctgtgagg tccctgctgt tctgaagctt gcctgtgcag acacatccct caatgaccgg
      601 atagacttta tcctaggttt tatccttctc ctggttcctc tttccttcat cctggcctct
      661 tatgtctgca tctttgccac cattctgaga atccgctcag cccaaggtcg tctgaaggcc
      721 ttttccacct gtgcctctca tatcaccgtg gtcaccatgt tctgtggacc tgccatgttt
      781 atgtacatga accccggggc caatgcttcc ccagagaggg acaagaaact ggctctgttc
      841 tacaatgtca tctctgcatt cctcaaccct ataatctaca gcctcagaaa caaagatgtg
      901 aagagggctt tcctcaaagt aacaggctgg ggaggagcta ctgagtga
//
