LOCUS       NM_001000407             939 bp    mRNA    linear   ROD 26-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 13 subfamily J member 1
            (Or13j1), mRNA.
ACCESSION   NM_001000407 XM_233374
VERSION     NM_001000407.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 939)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000005.1.
            
            On Aug 30, 2004 this sequence version replaced XM_233374.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-939               JAXUCZ010000005.1  62757159-62758097   c
FEATURES             Location/Qualifiers
     source          1..939
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q22"
     gene            1..939
                     /gene="Or13j1"
                     /gene_synonym="Olr834"
                     /note="olfactory receptor family 13 subfamily J member 1"
                     /db_xref="GeneID:298396"
                     /db_xref="RGD:1333724"
     CDS             1..939
                     /gene="Or13j1"
                     /gene_synonym="Olr834"
                     /note="olfactory receptor gene Olr834; olfactory receptor
                     834"
                     /codon_start=1
                     /product="olfactory receptor Olr834"
                     /protein_id="NP_001000407.1"
                     /db_xref="GeneID:298396"
                     /db_xref="RGD:1333724"
                     /translation="MEPSNRTAFSEFILKGFSGYPALEHLLFPLCSVMYLVTLLGNTA
                     IVVVSILDARLHTPMYFFLGNLSILDICYTSTFVPLMLVHLLSSRKTISFSGCAIQMC
                     LSLSTGSTECLLLAVMAYDRYLAICQPLRYPVLMSHRLCLMLAGTSWVLCLFKSVTET
                     VIAMRLPFCGRHVIRHFTCEILAVLKLACGDTSVSDAFLLVGAILLLPVPLTLICLSY
                     MLILATILRVPSATGRRKAFSTCSAHLAVVLLFYSTIIFMYMKPKSKEARISDQVFTV
                     LYAVVTPMLNPIIYSLRNKEVKEAARKAWGSRWVCR"
     exon            1..939
                     /gene="Or13j1"
                     /gene_synonym="Olr834"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atggagccca gcaacagaac agcattctct gagttcatct tgaagggatt ttctggctac
       61 ccagccctgg agcacctact ctttcctctg tgttcagtta tgtacctggt gaccctgctg
      121 gggaacacgg ccatcgtggt ggtgagcatc ttggatgctc gcctacacac gcccatgtac
      181 tttttcctgg gtaacctttc catcttggac atctgctaca cgtctacctt tgtgcccctg
      241 atgctggtcc acctcctgtc atcccggaag accatctcct ttagtggctg tgccatccag
      301 atgtgtctga gcctctctac gggctccacc gagtgcctgc tgctagcggt catggcctac
      361 gaccgctact tggccatctg ccagccgctc aggtaccccg tgctcatgag ccacaggctc
      421 tgcctgatgc tagcgggaac ctcctgggtg ctctgcctct tcaagtcagt gacagagacg
      481 gtcatcgcca tgaggctgcc cttctgcggc cgccacgtga tcagacactt cacctgtgag
      541 atcctggctg tgctgaagtt ggcctgtggg gatacatcag tcagcgatgc ctttctgctg
      601 gtgggagcca tcctcctgct gcccgtaccc ctgaccctca tctgcctgtc ctacatgcta
      661 atcctggcca ccatcctgag ggtgccctca gccaccgggc gccgcaaagc cttctccacc
      721 tgctcggcac acctggctgt ggttctgctt ttctacagta ccatcatctt catgtacatg
      781 aaacccaaga gcaaagaggc tcgtatctca gaccaggtct ttacagtcct ctacgctgtg
      841 gtgaccccca tgctgaaccc cattatctac agcctgagga acaaggaggt aaaggaggct
      901 gccaggaaag cttggggcag cagatgggtc tgtaggtga
//
