LOCUS       NM_001000668             945 bp    mRNA    linear   ROD 26-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 12 subfamily E member 9
            (Or12e9), mRNA.
ACCESSION   NM_001000668
VERSION     NM_001000668.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 945)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000003.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-945               JAXUCZ010000003.1  93172223-93173167
FEATURES             Location/Qualifiers
     source          1..945
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q24"
     gene            1..945
                     /gene="Or12e9"
                     /gene_synonym="Olr559"
                     /note="olfactory receptor family 12 subfamily E member 9"
                     /db_xref="GeneID:404870"
                     /db_xref="RGD:1333703"
     CDS             1..945
                     /gene="Or12e9"
                     /gene_synonym="Olr559"
                     /note="olfactory receptor gene Olr559; olfactory receptor
                     559"
                     /codon_start=1
                     /product="olfactory receptor Olr559"
                     /protein_id="NP_001000668.1"
                     /db_xref="GeneID:404870"
                     /db_xref="RGD:1333703"
                     /translation="MKHTDIREEDNASTVTQFLLLGFSDLPNLQSFLFGIFSIMYLII
                     LIANSFIIVITTLDPALQKPMYFFLVNFSFLEICYVSVILPRILYSIWTHNRNISLLA
                     CAIQMCFFLMLAATESILLAVMSYDRYVAICNPLHYALVMNPRKCRQLAAGSWLGGMP
                     FQLGQTCQIFSLHFCNSNQIDHFFCDIPPVLKLACGDTSVNEMYVYVVAILLAAIPFI
                     LILTSYSKIIATILRLPTAEGRAKAFSTCSSHLVVVVLFFASASITYLMPKSTHSAVS
                     DKFLSLFYTIVTPIFNPMIYCLRNKEVIAALRRLLLRT"
     exon            1..945
                     /gene="Or12e9"
                     /gene_synonym="Olr559"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgaaacaca cagacatcag ggaagaggac aatgcctcca cagtgacaca gtttcttctg
       61 cttggatttt ctgatcttcc caacctccag agctttctat ttgggatatt ctctataatg
      121 tacttgatta tactaattgc caatagtttc ataattgtta taaccacact ggatcctgca
      181 ctacagaaac ccatgtattt tttcctggtc aacttttctt ttctggaaat ctgttatgta
      241 tcagtcattc tccctaggat tctgtacagc atttggacac acaacagaaa tatttctctt
      301 ctggcttgtg ctatacaaat gtgcttcttc ctaatgctgg cagccactga aagtattctc
      361 ctggccgtga tgtcctatga tcgctatgtg gccatctgta atcctctgca ctatgctctg
      421 gtcatgaacc caagaaaatg caggcagctg gcagcagggt cctggctcgg tggcatgcca
      481 ttccagcttg ggcaaacctg tcaaatattc tctctacatt tctgtaactc taaccaaata
      541 gatcacttct tctgtgacat acctcctgta cttaaactgg cctgtggaga cacttctgtt
      601 aatgagatgt atgtctatgt agtggctatc ttgcttgctg caatcccttt tatactaata
      661 ctaacatcgt acagcaaaat tattgccacc atcctgaggc tgccaacagc agaaggacga
      721 gcaaaagcct tctccacatg ttcttcccac ctagtggttg tagttttgtt ttttgcctct
      781 gcatctatta cctacttaat gccaaaatca actcattctg cagtaagtga caaattcctt
      841 tctcttttct acaccattgt cacccccatt ttcaatccca tgatttattg ccttaggaac
      901 aaagaggtta ttgcagctct gagaagatta ttgcttagaa catag
//
