LOCUS       NM_001000665             945 bp    mRNA    linear   ROD 24-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 12 subfamily E member 7
            (Or12e7), mRNA.
ACCESSION   NM_001000665
VERSION     NM_001000665.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 945)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 945)
  AUTHORS   Gibbs,R.A., Weinstock,G.M., Metzker,M.L., Muzny,D.M.,
            Sodergren,E.J., Scherer,S., Scott,G., Steffen,D., Worley,K.C.,
            Burch,P.E., Okwuonu,G., Hines,S., Lewis,L., DeRamo,C., Delgado,O.,
            Dugan-Rocha,S., Miner,G., Morgan,M., Hawes,A., Gill,R., Celera,
            Holt,R.A., Adams,M.D., Amanatides,P.G., Baden-Tillson,H.,
            Barnstead,M., Chin,S., Evans,C.A., Ferriera,S., Fosler,C.,
            Glodek,A., Gu,Z., Jennings,D., Kraft,C.L., Nguyen,T.,
            Pfannkoch,C.M., Sitter,C., Sutton,G.G., Venter,J.C., Woodage,T.,
            Smith,D., Lee,H.M., Gustafson,E., Cahill,P., Kana,A.,
            Doucette-Stamm,L., Weinstock,K., Fechtel,K., Weiss,R.B., Dunn,D.M.,
            Green,E.D., Blakesley,R.W., Bouffard,G.G., De Jong,P.J.,
            Osoegawa,K., Zhu,B., Marra,M., Schein,J., Bosdet,I., Fjell,C.,
            Jones,S., Krzywinski,M., Mathewson,C., Siddiqui,A., Wye,N.,
            McPherson,J., Zhao,S., Fraser,C.M., Shetty,J., Shatsman,S.,
            Geer,K., Chen,Y., Abramzon,S., Nierman,W.C., Havlak,P.H., Chen,R.,
            Durbin,K.J., Simons,R., Ren,Y., Song,X.Z., Li,B., Liu,Y., Qin,X.,
            Cawley,S., Worley,K.C., Cooney,A.J., D'Souza,L.M., Martin,K.,
            Wu,J.Q., Gonzalez-Garay,M.L., Jackson,A.R., Kalafus,K.J.,
            McLeod,M.P., Milosavljevic,A., Virk,D., Volkov,A., Wheeler,D.A.,
            Zhang,Z., Bailey,J.A., Eichler,E.E., Tuzun,E., Birney,E.,
            Mongin,E., Ureta-Vidal,A., Woodwark,C., Zdobnov,E., Bork,P.,
            Suyama,M., Torrents,D., Alexandersson,M., Trask,B.J., Young,J.M.,
            Huang,H., Wang,H., Xing,H., Daniels,S., Gietzen,D., Schmidt,J.,
            Stevens,K., Vitt,U., Wingrove,J., Camara,F., Mar Alba,M.,
            Abril,J.F., Guigo,R., Smit,A., Dubchak,I., Rubin,E.M., Couronne,O.,
            Poliakov,A., Hubner,N., Ganten,D., Goesele,C., Hummel,O.,
            Kreitler,T., Lee,Y.A., Monti,J., Schulz,H., Zimdahl,H.,
            Himmelbauer,H., Lehrach,H., Jacob,H.J., Bromberg,S.,
            Gullings-Handley,J., Jensen-Seaman,M.I., Kwitek,A.E., Lazar,J.,
            Pasko,D., Tonellato,P.J., Twigger,S., Ponting,C.P., Duarte,J.M.,
            Rice,S., Goodstadt,L., Beatson,S.A., Emes,R.D., Winter,E.E.,
            Webber,C., Brandt,P., Nyakatura,G., Adetobi,M., Chiaromonte,F.,
            Elnitski,L., Eswara,P., Hardison,R.C., Hou,M., Kolbe,D., Makova,K.,
            Miller,W., Nekrutenko,A., Riemer,C., Schwartz,S., Taylor,J.,
            Yang,S., Zhang,Y., Lindpaintner,K., Andrews,T.D., Caccamo,M.,
            Clamp,M., Clarke,L., Curwen,V., Durbin,R., Eyras,E., Searle,S.M.,
            Cooper,G.M., Batzoglou,S., Brudno,M., Sidow,A., Stone,E.A.,
            Venter,J.C., Payseur,B.A., Bourque,G., Lopez-Otin,C., Puente,X.S.,
            Chakrabarti,K., Chatterji,S., Dewey,C., Pachter,L., Bray,N.,
            Yap,V.B., Caspi,A., Tesler,G., Pevzner,P.A., Haussler,D.,
            Roskin,K.M., Baertsch,R., Clawson,H., Furey,T.S., Hinrichs,A.S.,
            Karolchik,D., Kent,W.J., Rosenbloom,K.R., Trumbower,H.,
            Weirauch,M., Cooper,D.N., Stenson,P.D., Ma,B., Brent,M.,
            Arumugam,M., Shteynberg,D., Copley,R.R., Taylor,M.S., Riethman,H.,
            Mudunuri,U., Peterson,J., Guyer,M., Felsenfeld,A., Old,S.,
            Mockrin,S. and Collins,F.
  CONSRTM   Rat Genome Sequencing Project Consortium
  TITLE     Genome sequence of the Brown Norway rat yields insights into
            mammalian evolution
  JOURNAL   Nature 428 (6982), 493-521 (2004)
   PUBMED   15057822
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000003.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-945               JAXUCZ010000003.1  93299324-93300268
FEATURES             Location/Qualifiers
     source          1..945
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q24"
     gene            1..945
                     /gene="Or12e7"
                     /gene_synonym="Olr566"
                     /note="olfactory receptor family 12 subfamily E member 7"
                     /db_xref="GeneID:404867"
                     /db_xref="RGD:1333224"
     CDS             1..945
                     /gene="Or12e7"
                     /gene_synonym="Olr566"
                     /note="olfactory receptor gene Olr566; olfactory receptor
                     566"
                     /codon_start=1
                     /product="olfactory receptor Olr566"
                     /protein_id="NP_001000665.1"
                     /db_xref="GeneID:404867"
                     /db_xref="RGD:1333224"
                     /translation="MKSTEIRAEDNATTVTQFLLLGFSDLPNLQGILFGMFSIIYLII
                     LIGNSFIIVITRIDPALQKPMYFFLANFSTLEICYVSVTLPRILFNIATQDRSISVLS
                     CATQMCFFLMLGATECFLLAVMSYDRYVAICNPLHYPLVMNPTKCTRLAAGSWLGGIP
                     VQIGQTCQIFSLRFCNSNQIKHFFCDLPPILKLACGDTSIHELSVYLVAMLFVAFPFT
                     LILASYSKIIATILKLPTATGRAKAFSTCSSHLLVVFLFFGSATVTYLRPKSTHSPGI
                     DKLLSLFYTIVTPMFNPLIYSLRNKEVIAALKKLLPKK"
     exon            1..945
                     /gene="Or12e7"
                     /gene_synonym="Olr566"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgaaatcca cagaaatcag ggcagaggac aacgctacca ctgtgacaca gtttctcctc
       61 ctgggatttt cagaccttcc taacttacaa gggattctgt ttgggatgtt ctccataatt
      121 tacttaatca tcttgattgg aaatagtttc ataattgtga taactagaat tgatcctgca
      181 ctacagaagc ccatgtattt tttcctggca aatttttcta ctcttgaaat ctgttatgta
      241 tcagtcacac ttcctaggat tctgttcaac attgctactc aagacagaag catatctgta
      301 ctgagctgtg ccacacaaat gtgtttcttc ctgatgctgg gagccactga gtgtttcctg
      361 ctggctgtga tgtcctatga ccgctatgtg gccatctgta atcctctgca ctatcctctt
      421 gtcatgaacc caacaaagtg cactcggctg gcagcaggct cctggctggg aggtatccca
      481 gtccagatag gacaaacctg tcagatattc tctctacgtt tttgcaattc taaccaaata
      541 aaacatttct tttgtgactt accgcccatt ctcaagctgg cctgtgggga tacttcaata
      601 catgagctgt ctgtctactt agtggctatg ctgtttgttg ctttcccttt cacactgata
      661 cttgcctctt acagcaaaat cattgccacc attctgaagc tgccaacagc cacaggacgg
      721 gcaaaagcat tttccacatg ttcttcccat ttgcttgtgg tgtttttgtt ttttggatca
      781 gctactgtta cctatttgag gccaaaatct acccattctc caggaattga caaactgctg
      841 tctctgtttt acactattgt gactcccatg ttcaatccac tgatatacag ccttagaaac
      901 aaggaagtga ttgctgcact gaaaaagctg ttacctaaaa agtag
//
