LOCUS       NM_001000841             939 bp    mRNA    linear   ROD 26-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 11 subfamily J member 4
            (Or11j4), mRNA.
ACCESSION   NM_001000841
VERSION     NM_001000841.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 939)
  AUTHORS   Gibbs,R.A., Weinstock,G.M., Metzker,M.L., Muzny,D.M.,
            Sodergren,E.J., Scherer,S., Scott,G., Steffen,D., Worley,K.C.,
            Burch,P.E., Okwuonu,G., Hines,S., Lewis,L., DeRamo,C., Delgado,O.,
            Dugan-Rocha,S., Miner,G., Morgan,M., Hawes,A., Gill,R., Celera,
            Holt,R.A., Adams,M.D., Amanatides,P.G., Baden-Tillson,H.,
            Barnstead,M., Chin,S., Evans,C.A., Ferriera,S., Fosler,C.,
            Glodek,A., Gu,Z., Jennings,D., Kraft,C.L., Nguyen,T.,
            Pfannkoch,C.M., Sitter,C., Sutton,G.G., Venter,J.C., Woodage,T.,
            Smith,D., Lee,H.M., Gustafson,E., Cahill,P., Kana,A.,
            Doucette-Stamm,L., Weinstock,K., Fechtel,K., Weiss,R.B., Dunn,D.M.,
            Green,E.D., Blakesley,R.W., Bouffard,G.G., De Jong,P.J.,
            Osoegawa,K., Zhu,B., Marra,M., Schein,J., Bosdet,I., Fjell,C.,
            Jones,S., Krzywinski,M., Mathewson,C., Siddiqui,A., Wye,N.,
            McPherson,J., Zhao,S., Fraser,C.M., Shetty,J., Shatsman,S.,
            Geer,K., Chen,Y., Abramzon,S., Nierman,W.C., Havlak,P.H., Chen,R.,
            Durbin,K.J., Simons,R., Ren,Y., Song,X.Z., Li,B., Liu,Y., Qin,X.,
            Cawley,S., Worley,K.C., Cooney,A.J., D'Souza,L.M., Martin,K.,
            Wu,J.Q., Gonzalez-Garay,M.L., Jackson,A.R., Kalafus,K.J.,
            McLeod,M.P., Milosavljevic,A., Virk,D., Volkov,A., Wheeler,D.A.,
            Zhang,Z., Bailey,J.A., Eichler,E.E., Tuzun,E., Birney,E.,
            Mongin,E., Ureta-Vidal,A., Woodwark,C., Zdobnov,E., Bork,P.,
            Suyama,M., Torrents,D., Alexandersson,M., Trask,B.J., Young,J.M.,
            Huang,H., Wang,H., Xing,H., Daniels,S., Gietzen,D., Schmidt,J.,
            Stevens,K., Vitt,U., Wingrove,J., Camara,F., Mar Alba,M.,
            Abril,J.F., Guigo,R., Smit,A., Dubchak,I., Rubin,E.M., Couronne,O.,
            Poliakov,A., Hubner,N., Ganten,D., Goesele,C., Hummel,O.,
            Kreitler,T., Lee,Y.A., Monti,J., Schulz,H., Zimdahl,H.,
            Himmelbauer,H., Lehrach,H., Jacob,H.J., Bromberg,S.,
            Gullings-Handley,J., Jensen-Seaman,M.I., Kwitek,A.E., Lazar,J.,
            Pasko,D., Tonellato,P.J., Twigger,S., Ponting,C.P., Duarte,J.M.,
            Rice,S., Goodstadt,L., Beatson,S.A., Emes,R.D., Winter,E.E.,
            Webber,C., Brandt,P., Nyakatura,G., Adetobi,M., Chiaromonte,F.,
            Elnitski,L., Eswara,P., Hardison,R.C., Hou,M., Kolbe,D., Makova,K.,
            Miller,W., Nekrutenko,A., Riemer,C., Schwartz,S., Taylor,J.,
            Yang,S., Zhang,Y., Lindpaintner,K., Andrews,T.D., Caccamo,M.,
            Clamp,M., Clarke,L., Curwen,V., Durbin,R., Eyras,E., Searle,S.M.,
            Cooper,G.M., Batzoglou,S., Brudno,M., Sidow,A., Stone,E.A.,
            Venter,J.C., Payseur,B.A., Bourque,G., Lopez-Otin,C., Puente,X.S.,
            Chakrabarti,K., Chatterji,S., Dewey,C., Pachter,L., Bray,N.,
            Yap,V.B., Caspi,A., Tesler,G., Pevzner,P.A., Haussler,D.,
            Roskin,K.M., Baertsch,R., Clawson,H., Furey,T.S., Hinrichs,A.S.,
            Karolchik,D., Kent,W.J., Rosenbloom,K.R., Trumbower,H.,
            Weirauch,M., Cooper,D.N., Stenson,P.D., Ma,B., Brent,M.,
            Arumugam,M., Shteynberg,D., Copley,R.R., Taylor,M.S., Riethman,H.,
            Mudunuri,U., Peterson,J., Guyer,M., Felsenfeld,A., Old,S.,
            Mockrin,S. and Collins,F.
  CONSRTM   Rat Genome Sequencing Project Consortium
  TITLE     Genome sequence of the Brown Norway rat yields insights into
            mammalian evolution
  JOURNAL   Nature 428 (6982), 493-521 (2004)
   PUBMED   15057822
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000015.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-939               JAXUCZ010000015.1  26048732-26049670
FEATURES             Location/Qualifiers
     source          1..939
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="15"
                     /map="15p14"
     gene            1..939
                     /gene="Or11j4"
                     /gene_synonym="Olr1614"
                     /note="olfactory receptor family 11 subfamily J member 4"
                     /db_xref="GeneID:405130"
                     /db_xref="RGD:1333269"
     CDS             1..939
                     /gene="Or11j4"
                     /gene_synonym="Olr1614"
                     /note="olfactory receptor gene Olr1614; olfactory receptor
                     1614"
                     /codon_start=1
                     /product="olfactory receptor Olr1614"
                     /protein_id="NP_001000841.1"
                     /db_xref="GeneID:405130"
                     /db_xref="RGD:1333269"
                     /translation="MNSARNVSHTVSHFILLGFPCRREIQIFLFSVFFMIYILTLLGN
                     MAIVYAVHWDHRLHTPMYILLANFSFLEICYVNSDVPNMLVNFLSTTKTISFTQCLLQ
                     LYFFFSLGTTECLFLSIMAYDRFLAICRPLYYPTVMTTRFCGNLVIFCWVYGFLWFLI
                     PVILITQLPFCGPNVIDDFLCDLGPLLALASVCVPIPGTVLICGTMSSLLIFGTFFYI
                     IGSYTLVLRAVIRMPSSAGSKKAFSTCSSHLAVVFLFYGSVMITYVSPGSGQAKGMQK
                     FTTLFYSVLTPFFNPMIYSLRNKEMKDALKKVVGGS"
     exon            1..939
                     /gene="Or11j4"
                     /gene_synonym="Olr1614"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgaactcag ccagaaatgt ctcccatact gtaagtcact tcatcctctt aggcttcccc
       61 tgccgcagag aaatacaaat cttccttttc tctgtattct ttatgatcta cattttgacc
      121 ttgcttggaa atatggcaat tgtgtatgca gtgcactggg atcatcggct tcataccccc
      181 atgtacattc ttctggccaa tttctccttc ctagagatat gctacgtcaa ctctgatgtg
      241 ccaaacatgc tggtcaactt cctctccaca accaaaacca tctccttcac tcaatgccta
      301 ctccagttgt acttcttctt ctccctgggc acaactgaat gtctatttct ctctatcatg
      361 gcctatgaca gattcctggc aatctgccgc ccactgtact atcccactgt catgaccact
      421 aggttctgtg gcaaccttgt catattttgc tgggtctatg ggttcctctg gtttcttatc
      481 ccagttatac tcattactca actgccattt tgtggaccaa atgtgattga tgactttctt
      541 tgtgacctcg gtcccttgct ggccctggct tcagtctgtg tcccaatccc aggcactgtt
      601 ctcatctgtg gcactatgag ttccctcctt atctttggca cattttttta cattattggt
      661 tcatatactt tagttctgag ggctgtgata cggatgccat cttctgctgg atcaaagaag
      721 gcattctcca catgttcatc gcacctggct gttgtatttc tattttatgg ttcagtcatg
      781 ataacatatg taagcccagg atcaggacaa gcaaagggta tgcaaaagtt cacaactttg
      841 ttctactcag ttttgactcc tttctttaac cccatgatct acagcctccg aaataaagaa
      901 atgaaagatg cattgaaaaa agttgtagga ggttcatag
//
