LOCUS       NM_001000474             939 bp    mRNA    linear   ROD 24-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 10 subfamily D member
            5J like (Or10d5jl), mRNA.
ACCESSION   NM_001000474 XM_236160
VERSION     NM_001000474.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 939)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000008.1.
            
            On Aug 30, 2004 this sequence version replaced XM_236160.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-513               JAXUCZ010000008.1  49134813-49135325
            514-939             JAXUCZ010000008.1  49135326-49135751
FEATURES             Location/Qualifiers
     source          1..939
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /map="8q22"
     gene            1..939
                     /gene="Or10d5jl"
                     /gene_synonym="Olr1326; ratchr8-42833026-42833964_ORF"
                     /note="olfactory receptor family 10 subfamily D member 5J
                     like"
                     /db_xref="GeneID:300626"
                     /db_xref="RGD:1332765"
     CDS             1..939
                     /gene="Or10d5jl"
                     /gene_synonym="Olr1326; ratchr8-42833026-42833964_ORF"
                     /note="olfactory receptor gene Olr1326; olfactory receptor
                     1326"
                     /codon_start=1
                     /product="olfactory receptor Olr1326"
                     /protein_id="NP_001000474.1"
                     /db_xref="GeneID:300626"
                     /db_xref="RGD:1332765"
                     /translation="MRNYTPVTEIIFLGIANSEGLESVLFILFLVFYVFALLGNLLIF
                     LTILASPNLHTPMYFFLGNLAVFDIFFPSVNSPKMMDSLVGQSRTISYQGCASQIFFY
                     HTLGCTECFLYTVMAYDRFVAICHPMRYTIIMNHRVCTGLTVGTWVGGFVHGSILTFL
                     IFKLPYCGPNEVDSFFCDIPIVLSLACADTSLARTVSFTNVGVVALVSLLLILTSYTR
                     IVISILKIRSSEGRRRAFSTCSAHFTSILLFYGPVILIYLRPASSPWLDSVIQVFNNI
                     VTPSLNPLIYSLRNKEVKLALRKVLSQVMQPLGHKE"
     exon            1..939
                     /gene="Or10d5jl"
                     /gene_synonym="Olr1326; ratchr8-42833026-42833964_ORF"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgaggaatt acacccctgt gacagagatc atttttctgg gaattgctaa cagtgaagga
       61 ctagagagcg tgctgttcat cttgttcctg gtcttctatg tctttgcctt gctggggaac
      121 ctgctcatct tcctcaccat cctggcttcc cccaacctcc acacccccat gtacttcttc
      181 ctggggaacc tggcagtgtt tgacattttc ttcccttctg tgaattctcc taagatgatg
      241 gactccctag tggggcagag ccgcaccatc tcatatcagg gttgcgcctc gcagattttc
      301 ttctatcaca ccctggggtg tactgagtgc ttcctgtata cagtgatggc ctatgaccgc
      361 tttgtggcta tttgtcaccc tatgagatac acaatcatca tgaatcacag ggtgtgtacg
      421 ggtctcacag tgggcacttg ggtggggggt tttgtccatg ggagcatcct cacttttctt
      481 atctttaagt taccctactg tggccccaat gaggtggaca gtttcttctg tgacattcct
      541 atagtactct ccctggcatg tgcagacacc tccctagcac ggactgtgag ttttaccaat
      601 gttggtgttg ttgcacttgt gagtcttctt ctcattctta cttcttacac tcgtattgtg
      661 atctccatcc tgaaaatccg ttcctcagaa ggcaggcgca gagccttctc cacctgcagt
      721 gcccacttca catccatact attgttctat ggtcccgtga tacttattta tctcaggcct
      781 gcttctagtc cctggctgga ttctgtgatc caggtgttta ataatattgt caccccttcc
      841 ttgaatcctc tgatttattc tttgagaaac aaggaagtaa aattagccct gagaaaggtg
      901 ttaagtcaag tgatgcaacc tttggggcat aaagaatag
//
