LOCUS       NM_001394957            1659 bp    mRNA    linear   ROD 28-MAR-2024
DEFINITION  Rattus norvegicus one cut homeobox 3 (Onecut3), mRNA.
ACCESSION   NM_001394957
VERSION     NM_001394957.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1659)
  AUTHORS   Vanhorenbeeck,V., Jacquemin,P., Lemaigre,F.P. and Rousseau,G.G.
  TITLE     OC-3, a novel mammalian member of the ONECUT class of transcription
            factors
  JOURNAL   Biochem Biophys Res Commun 292 (4), 848-854 (2002)
   PUBMED   11944891
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000007.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMN06680421,
                              SAMN06680422 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            inferred exon combination :: based on alignments, homology
            RefSeq Select criteria    :: based on single protein-coding
                                         transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1331              JAXUCZ010000007.1  9868658-9869988     c
            1332-1659           JAXUCZ010000007.1  9850685-9851012     c
FEATURES             Location/Qualifiers
     source          1..1659
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q11"
     gene            1..1659
                     /gene="Onecut3"
                     /note="one cut homeobox 3"
                     /db_xref="GeneID:120093758"
                     /db_xref="RGD:1591005"
     exon            1..1331
                     /gene="Onecut3"
                     /inference="alignment:Splign:2.1.0"
     CDS             146..1621
                     /gene="Onecut3"
                     /note="one cut domain, family member 3"
                     /codon_start=1
                     /product="one cut domain family member 3"
                     /protein_id="NP_001381886.1"
                     /db_xref="GeneID:120093758"
                     /db_xref="RGD:1591005"
                     /translation="MELSLESLGGLHGVTHAQAGELLSPGHARSAAAQHRSLVASGRP
                     GLVAGMASLLDGGGAGGGGAGGAGAAGAAGGGPDFRGELAGPLHPAMGMACEAPGLGG
                     TYTTLTPLQHLPPLAAVADKFHQHAVAGAHGGHPHAHPHPATAPPPPPPQRLAASVSG
                     SFTLMRDERAALASVGHLYGPYGKELPTMGSPLSPLPSALPPALHSAPQPPPPPPPLA
                     AYGAPGHLAGDKLLPPAAFEPHAALLGRAEDALARGLPGGGGGAGGGGAAGGAAAGLL
                     APLGGLATAGAHGPHSGGGGPGGGGGAGGGSGGPGAGAAAEEINTKEVAQRITAELKR
                     YSIPQAIFAQRILCRSQGTLSDLLRNPKPWSKLKSGRETFRRMWKWLQEPEFQRMSAL
                     RLAACKRKEQDQQKERALQPKKQRLVFTDLQRRTLIAIFKENKRPSKEMQATISQQLG
                     LELNTVSNFFMNARRRCMNRWAEEPGATPGTATATATFSKA"
     exon            1332..1659
                     /gene="Onecut3"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 acatcctggt ggccgctgct cgcagcagcc gaagccgggc gagagcactg aacgagcggg
       61 acagcagccg ccgccacgga gagcgccggc cagtgcgtgg ggaccatgct gcggccttga
      121 gcacacacgg agggggtcgc ccaggatgga gttgagcttg gagagcctcg gggggctgca
      181 cggggtgaca cacgcgcaag ccggcgagct gctgagcccg ggccacgcgc gctccgccgc
      241 ggcccaacac cgaagcctag tggcatcggg gcgtccgggc ctggtggcgg gcatggctag
      301 cctgctggac ggtggtggcg ccggaggcgg gggggccggg ggcgcgggag ctgcaggggc
      361 cgcgggtggt ggccctgact tccgtgggga gctggctggc cccctgcacc cggccatggg
      421 tatggcgtgc gaggccccag gtttgggtgg cacctacacc acgctcacgc ccttgcagca
      481 cctgccgccg ctggccgcgg tggccgacaa gttccaccag cacgcggtgg ccggggcgca
      541 cggaggccat ccgcacgcgc accctcaccc ggccaccgcg ccgccaccgc cccctccgca
      601 gcgcctggcg gccagcgtga gcggcagctt caccctcatg cgcgacgagc gggcggcgct
      661 ggcctcggtg ggccacctct acgggcccta tggcaaggag ctgcccacca tggggtcgcc
      721 actgtcgccg ctgcccagcg cgctgccccc ggctctgcac agcgccccgc agccgccgcc
      781 gccgccgccg ccgctcgccg cttacggggc tccgggccac ctggccgggg acaaactact
      841 gccacctgcc gctttcgagc cacacgccgc gctgcttggg cgcgcggagg acgcgctggc
      901 ccgagggctg cctggaggcg gcggcggcgc gggaggtggc ggggcggccg gcggggcggc
      961 cgcgggtttg ctggctccgc tgggcgggct ggctacggcc ggggcgcacg ggcctcactc
     1021 aggcggcggt ggccccggag ggggcggggg cgccggcggc ggcagcggcg gtccgggagc
     1081 aggcgccgca gccgaagaaa tcaacaccaa agaggtggcc cagcgcatca ccgccgagct
     1141 gaagcgctac agcatccctc aggccatctt cgcgcagcgt atcctgtgcc gctcgcaggg
     1201 cacgctctcg gacctgctgc gcaacccgaa gccctggagc aagctcaaat ccggccgcga
     1261 gaccttccgc aggatgtgga agtggctgca ggagcccgag ttccagcgca tgtcggcgct
     1321 gcgcctggca gcctgcaagc gtaaggagca ggatcagcag aaagagaggg ctctgcaacc
     1381 gaagaagcaa cgcctcgtgt tcacagacct gcagcgccgc acgctgatcg ccatcttcaa
     1441 ggagaacaag cggccctcca aggagatgca agccaccatc tcgcagcagc tgggcctgga
     1501 gctcaacacg gtcagcaact tcttcatgaa cgcccgtcgc cgctgcatga accgctgggc
     1561 tgaggagccg ggtgccaccc ctggcaccgc aacagccaca gccaccttct ccaaggcctg
     1621 agccttctgc ccgacactta ccccagcccc cggggaccg
//
