LOCUS       NM_001000112             939 bp    mRNA    linear   ROD 24-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor 5 (Olr5), mRNA.
ACCESSION   NM_001000112 XM_218231
VERSION     NM_001000112.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 939)
  AUTHORS   Gibbs,R.A., Weinstock,G.M., Metzker,M.L., Muzny,D.M.,
            Sodergren,E.J., Scherer,S., Scott,G., Steffen,D., Worley,K.C.,
            Burch,P.E., Okwuonu,G., Hines,S., Lewis,L., DeRamo,C., Delgado,O.,
            Dugan-Rocha,S., Miner,G., Morgan,M., Hawes,A., Gill,R., Celera,
            Holt,R.A., Adams,M.D., Amanatides,P.G., Baden-Tillson,H.,
            Barnstead,M., Chin,S., Evans,C.A., Ferriera,S., Fosler,C.,
            Glodek,A., Gu,Z., Jennings,D., Kraft,C.L., Nguyen,T.,
            Pfannkoch,C.M., Sitter,C., Sutton,G.G., Venter,J.C., Woodage,T.,
            Smith,D., Lee,H.M., Gustafson,E., Cahill,P., Kana,A.,
            Doucette-Stamm,L., Weinstock,K., Fechtel,K., Weiss,R.B., Dunn,D.M.,
            Green,E.D., Blakesley,R.W., Bouffard,G.G., De Jong,P.J.,
            Osoegawa,K., Zhu,B., Marra,M., Schein,J., Bosdet,I., Fjell,C.,
            Jones,S., Krzywinski,M., Mathewson,C., Siddiqui,A., Wye,N.,
            McPherson,J., Zhao,S., Fraser,C.M., Shetty,J., Shatsman,S.,
            Geer,K., Chen,Y., Abramzon,S., Nierman,W.C., Havlak,P.H., Chen,R.,
            Durbin,K.J., Simons,R., Ren,Y., Song,X.Z., Li,B., Liu,Y., Qin,X.,
            Cawley,S., Worley,K.C., Cooney,A.J., D'Souza,L.M., Martin,K.,
            Wu,J.Q., Gonzalez-Garay,M.L., Jackson,A.R., Kalafus,K.J.,
            McLeod,M.P., Milosavljevic,A., Virk,D., Volkov,A., Wheeler,D.A.,
            Zhang,Z., Bailey,J.A., Eichler,E.E., Tuzun,E., Birney,E.,
            Mongin,E., Ureta-Vidal,A., Woodwark,C., Zdobnov,E., Bork,P.,
            Suyama,M., Torrents,D., Alexandersson,M., Trask,B.J., Young,J.M.,
            Huang,H., Wang,H., Xing,H., Daniels,S., Gietzen,D., Schmidt,J.,
            Stevens,K., Vitt,U., Wingrove,J., Camara,F., Mar Alba,M.,
            Abril,J.F., Guigo,R., Smit,A., Dubchak,I., Rubin,E.M., Couronne,O.,
            Poliakov,A., Hubner,N., Ganten,D., Goesele,C., Hummel,O.,
            Kreitler,T., Lee,Y.A., Monti,J., Schulz,H., Zimdahl,H.,
            Himmelbauer,H., Lehrach,H., Jacob,H.J., Bromberg,S.,
            Gullings-Handley,J., Jensen-Seaman,M.I., Kwitek,A.E., Lazar,J.,
            Pasko,D., Tonellato,P.J., Twigger,S., Ponting,C.P., Duarte,J.M.,
            Rice,S., Goodstadt,L., Beatson,S.A., Emes,R.D., Winter,E.E.,
            Webber,C., Brandt,P., Nyakatura,G., Adetobi,M., Chiaromonte,F.,
            Elnitski,L., Eswara,P., Hardison,R.C., Hou,M., Kolbe,D., Makova,K.,
            Miller,W., Nekrutenko,A., Riemer,C., Schwartz,S., Taylor,J.,
            Yang,S., Zhang,Y., Lindpaintner,K., Andrews,T.D., Caccamo,M.,
            Clamp,M., Clarke,L., Curwen,V., Durbin,R., Eyras,E., Searle,S.M.,
            Cooper,G.M., Batzoglou,S., Brudno,M., Sidow,A., Stone,E.A.,
            Venter,J.C., Payseur,B.A., Bourque,G., Lopez-Otin,C., Puente,X.S.,
            Chakrabarti,K., Chatterji,S., Dewey,C., Pachter,L., Bray,N.,
            Yap,V.B., Caspi,A., Tesler,G., Pevzner,P.A., Haussler,D.,
            Roskin,K.M., Baertsch,R., Clawson,H., Furey,T.S., Hinrichs,A.S.,
            Karolchik,D., Kent,W.J., Rosenbloom,K.R., Trumbower,H.,
            Weirauch,M., Cooper,D.N., Stenson,P.D., Ma,B., Brent,M.,
            Arumugam,M., Shteynberg,D., Copley,R.R., Taylor,M.S., Riethman,H.,
            Mudunuri,U., Peterson,J., Guyer,M., Felsenfeld,A., Old,S.,
            Mockrin,S. and Collins,F.
  CONSRTM   Rat Genome Sequencing Project Consortium
  TITLE     Genome sequence of the Brown Norway rat yields insights into
            mammalian evolution
  JOURNAL   Nature 428 (6982), 493-521 (2004)
   PUBMED   15057822
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Aug 30, 2004 this sequence version replaced XM_218231.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-939               JAXUCZ010000001.1  76397079-76398017
FEATURES             Location/Qualifiers
     source          1..939
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q12"
     gene            1..939
                     /gene="Olr5"
                     /gene_synonym="ratchr1-65852087-65853025_ORF"
                     /note="olfactory receptor 5"
                     /db_xref="GeneID:292561"
                     /db_xref="RGD:1333445"
     CDS             1..939
                     /gene="Olr5"
                     /gene_synonym="ratchr1-65852087-65853025_ORF"
                     /note="olfactory receptor gene Olr5"
                     /codon_start=1
                     /product="olfactory receptor Olr5"
                     /protein_id="NP_001000112.1"
                     /db_xref="GeneID:292561"
                     /db_xref="RGD:1333445"
                     /translation="METSLDLTNMTRVHQFVLLGFPTRLGIRDTLFVIFLGLYLLTLV
                     ENALIIYLICSHSELHKPMYFFLGNLSCLEMCYVSTTMPTLLVGLWTGPYHISFVTCM
                     TQLFFFVSLICTECTLLASMAYDRYVAICRPLHYPLLMRPQVCLGLALSSWLGGLVVS
                     AIKTKCIASLTYCGPNVLNQFFCDVSPLLNLSCTHVALTELVDFISAIVIFCGTLLVS
                     LASYSAIGMAVLRMPSAAARRKAFSTCASHLVVVGIFYSAALFIYCRPSRIKSMDLNK
                     VLSVIYTVVTPLCNPIIYCLRNKEVHTVLKKTLHWP"
     exon            1..939
                     /gene="Olr5"
                     /gene_synonym="ratchr1-65852087-65853025_ORF"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atggagacat cacttgattt gaccaacatg accagagtcc atcaatttgt gttgttaggt
       61 tttcctacga ggttggggat aagggatacc ttgtttgtca tcttcctggg tctctacctg
      121 ctgacactcg tggagaacgc actcatcatc tacctcatct gcagtcacag tgagctccac
      181 aagcccatgt acttcttcct gggcaacctc agctgcctgg agatgtgcta tgtgtcaacc
      241 accatgccca ctctactcgt ggggctatgg accgggccct accatatttc ttttgtaact
      301 tgcatgacgc aactcttctt ctttgtttct ctcatctgca cagagtgcac cctcctggcc
      361 tccatggctt atgaccgcta tgtggccatc tgccgcccac tacactatcc actgctcatg
      421 aggccccaag tatgcctggg cttagccttg tcttcgtggc tgggtgggct ggtggtctca
      481 gcaataaaga caaaatgcat tgccagcttg acctactgtg gccccaatgt cctcaaccaa
      541 tttttctgtg atgtctcccc tctgctcaac ttgtcctgca cccatgtggc cctcacagag
      601 ctggtagact tcatctcagc cattgtcatc ttctgtggaa cactcctggt gtccctggcc
      661 tcctactcag ccatcgggat ggctgtactc cgcatgccat cagctgctgc ccggcgcaag
      721 gccttctcca cctgtgcctc ccacctggta gtggtgggca ttttctactc agcggctctc
      781 ttcatctatt gccgccccag ccgcatcaag tccatggacc tcaacaaggt gctgtctgtc
      841 atctacacgg tggtcacacc tctctgcaac cctatcatct actgtttaag gaataaggag
      901 gtccacactg tgctgaagaa gactctccac tggccttag
//
