LOCUS       NM_001000186             942 bp    mRNA    linear   ROD 24-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor 193 (Olr193), mRNA.
ACCESSION   NM_001000186 XM_219090
VERSION     NM_001000186.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 942)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 942)
  AUTHORS   Gibbs,R.A., Weinstock,G.M., Metzker,M.L., Muzny,D.M.,
            Sodergren,E.J., Scherer,S., Scott,G., Steffen,D., Worley,K.C.,
            Burch,P.E., Okwuonu,G., Hines,S., Lewis,L., DeRamo,C., Delgado,O.,
            Dugan-Rocha,S., Miner,G., Morgan,M., Hawes,A., Gill,R., Celera,
            Holt,R.A., Adams,M.D., Amanatides,P.G., Baden-Tillson,H.,
            Barnstead,M., Chin,S., Evans,C.A., Ferriera,S., Fosler,C.,
            Glodek,A., Gu,Z., Jennings,D., Kraft,C.L., Nguyen,T.,
            Pfannkoch,C.M., Sitter,C., Sutton,G.G., Venter,J.C., Woodage,T.,
            Smith,D., Lee,H.M., Gustafson,E., Cahill,P., Kana,A.,
            Doucette-Stamm,L., Weinstock,K., Fechtel,K., Weiss,R.B., Dunn,D.M.,
            Green,E.D., Blakesley,R.W., Bouffard,G.G., De Jong,P.J.,
            Osoegawa,K., Zhu,B., Marra,M., Schein,J., Bosdet,I., Fjell,C.,
            Jones,S., Krzywinski,M., Mathewson,C., Siddiqui,A., Wye,N.,
            McPherson,J., Zhao,S., Fraser,C.M., Shetty,J., Shatsman,S.,
            Geer,K., Chen,Y., Abramzon,S., Nierman,W.C., Havlak,P.H., Chen,R.,
            Durbin,K.J., Simons,R., Ren,Y., Song,X.Z., Li,B., Liu,Y., Qin,X.,
            Cawley,S., Worley,K.C., Cooney,A.J., D'Souza,L.M., Martin,K.,
            Wu,J.Q., Gonzalez-Garay,M.L., Jackson,A.R., Kalafus,K.J.,
            McLeod,M.P., Milosavljevic,A., Virk,D., Volkov,A., Wheeler,D.A.,
            Zhang,Z., Bailey,J.A., Eichler,E.E., Tuzun,E., Birney,E.,
            Mongin,E., Ureta-Vidal,A., Woodwark,C., Zdobnov,E., Bork,P.,
            Suyama,M., Torrents,D., Alexandersson,M., Trask,B.J., Young,J.M.,
            Huang,H., Wang,H., Xing,H., Daniels,S., Gietzen,D., Schmidt,J.,
            Stevens,K., Vitt,U., Wingrove,J., Camara,F., Mar Alba,M.,
            Abril,J.F., Guigo,R., Smit,A., Dubchak,I., Rubin,E.M., Couronne,O.,
            Poliakov,A., Hubner,N., Ganten,D., Goesele,C., Hummel,O.,
            Kreitler,T., Lee,Y.A., Monti,J., Schulz,H., Zimdahl,H.,
            Himmelbauer,H., Lehrach,H., Jacob,H.J., Bromberg,S.,
            Gullings-Handley,J., Jensen-Seaman,M.I., Kwitek,A.E., Lazar,J.,
            Pasko,D., Tonellato,P.J., Twigger,S., Ponting,C.P., Duarte,J.M.,
            Rice,S., Goodstadt,L., Beatson,S.A., Emes,R.D., Winter,E.E.,
            Webber,C., Brandt,P., Nyakatura,G., Adetobi,M., Chiaromonte,F.,
            Elnitski,L., Eswara,P., Hardison,R.C., Hou,M., Kolbe,D., Makova,K.,
            Miller,W., Nekrutenko,A., Riemer,C., Schwartz,S., Taylor,J.,
            Yang,S., Zhang,Y., Lindpaintner,K., Andrews,T.D., Caccamo,M.,
            Clamp,M., Clarke,L., Curwen,V., Durbin,R., Eyras,E., Searle,S.M.,
            Cooper,G.M., Batzoglou,S., Brudno,M., Sidow,A., Stone,E.A.,
            Venter,J.C., Payseur,B.A., Bourque,G., Lopez-Otin,C., Puente,X.S.,
            Chakrabarti,K., Chatterji,S., Dewey,C., Pachter,L., Bray,N.,
            Yap,V.B., Caspi,A., Tesler,G., Pevzner,P.A., Haussler,D.,
            Roskin,K.M., Baertsch,R., Clawson,H., Furey,T.S., Hinrichs,A.S.,
            Karolchik,D., Kent,W.J., Rosenbloom,K.R., Trumbower,H.,
            Weirauch,M., Cooper,D.N., Stenson,P.D., Ma,B., Brent,M.,
            Arumugam,M., Shteynberg,D., Copley,R.R., Taylor,M.S., Riethman,H.,
            Mudunuri,U., Peterson,J., Guyer,M., Felsenfeld,A., Old,S.,
            Mockrin,S. and Collins,F.
  CONSRTM   Rat Genome Sequencing Project Consortium
  TITLE     Genome sequence of the Brown Norway rat yields insights into
            mammalian evolution
  JOURNAL   Nature 428 (6982), 493-521 (2004)
   PUBMED   15057822
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Feb 11, 2021 this sequence version replaced NM_001000186.2.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-942               JAXUCZ010000001.1  168926471-168927412 c
FEATURES             Location/Qualifiers
     source          1..942
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q32"
     gene            1..942
                     /gene="Olr193"
                     /note="olfactory receptor 193"
                     /db_xref="GeneID:293336"
                     /db_xref="RGD:1332887"
     CDS             1..942
                     /gene="Olr193"
                     /note="olfactory receptor gene Olr193"
                     /codon_start=1
                     /product="olfactory receptor Olr193"
                     /protein_id="NP_001000186.1"
                     /db_xref="GeneID:293336"
                     /db_xref="RGD:1332887"
                     /translation="MALSNNNSEAPTPEFLLICFPNYQTWQHWLSLPLSLLFLLAMGA
                     NATLLITIRMEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDHKSIGFSACFL
                     QMFVMNSFLTMESCTFMVMAYDRYVAICKPLQYPSIITDQFVVRAAIFIISRNALFSL
                     PVPILSARLRYCAHNIIKNCICTNLSVSKLSCDDITFNKLYQLVAGWTLLGSDLILIV
                     LSYSFIFRVVLRIKAEGAVAKALSTCGSHFILILFFSTVLLVLVITNLARERIPPDVP
                     ILLNILHHLIPPALNPIVYGVRTREIKQGIQNLLRRW"
     exon            1..942
                     /gene="Olr193"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atggcattat ccaataacaa ctctgaagct cccactcctg aatttctcct catctgcttt
       61 cccaactacc agacctggca acattggctg tccctgcccc tcagcctcct cttcctcctg
      121 gccatggggg ccaatgccac ccttctcatc accatcagga tggaggcctc tctgcatgag
      181 cccatgtact acctgctcag ccttctgtcc ctgctagaca ttgtgctctg cctcacagtc
      241 atacctaagg tcctggccat cttctggttt gaccataaat ccatcggctt ctctgcctgc
      301 ttcctccaga tgtttgtcat gaacagtttc ctgacgatgg agtcttgcac cttcatggtc
      361 atggcctatg accgctatgt ggccatctgt aagcctctgc agtatccgtc catcatcact
      421 gaccagtttg tggttagggc tgccatcttc attataagcc ggaatgccct tttttctctc
      481 cctgttccca tcctttctgc cagactaagg tactgcgctc ataatatcat caagaactgc
      541 atctgcacca acctgtcagt gtccaagctc tcctgtgatg acattacctt caataaacta
      601 tatcagcttg tagcaggttg gaccctgctg ggctctgacc tcatcctcat tgtcctctct
      661 tactctttta tcttccgtgt tgtgctcagg atcaaagcag agggagctgt ggccaaggcc
      721 ctgagcacat gtggttccca cttcatcctc atcctcttct tcagcacagt cctgctggtg
      781 ctggtcatca ctaacctggc cagggagagg attcctccgg atgtccccat cctgcttaac
      841 atcctgcatc acctcatccc cccagctctt aatcctattg tgtatggggt gagaaccagg
      901 gagattaagc agggaattca gaacttgctg aggaggtggt aa
//
