LOCUS       NM_001408863            3065 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus olfactory receptor 1877 (Olr1877), mRNA.
ACCESSION   NM_001408863 XM_006242360
VERSION     NM_001408863.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3065)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000007.1.
            
            On Jun 29, 2022 this sequence version replaced XM_006242360.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360194.1738031.1,
                                           SRR26360172.601263.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760389, SAMEA5760434
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-201               JAXUCZ010000007.1  131260692-131260892 c
            202-310             JAXUCZ010000007.1  131255559-131255667 c
            311-3065            JAXUCZ010000007.1  131249202-131251956 c
FEATURES             Location/Qualifiers
     source          1..3065
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q36"
     gene            1..3065
                     /gene="Olr1877"
                     /gene_synonym="RGD1560560"
                     /note="olfactory receptor 1877"
                     /db_xref="GeneID:500927"
                     /db_xref="RGD:1560560"
     exon            1..201
                     /gene="Olr1877"
                     /gene_synonym="RGD1560560"
                     /inference="alignment:Splign:2.1.0"
     exon            202..310
                     /gene="Olr1877"
                     /gene_synonym="RGD1560560"
                     /inference="alignment:Splign:2.1.0"
     CDS             306..1280
                     /gene="Olr1877"
                     /gene_synonym="RGD1560560"
                     /note="olfactory receptor 10AD1-like"
                     /codon_start=1
                     /product="olfactory receptor 1877"
                     /protein_id="NP_001395792.1"
                     /db_xref="GeneID:500927"
                     /db_xref="RGD:1560560"
                     /translation="MSRPPKGDPRNGSTVTEFILVGFEHSSPSTRALLFTLFLALYSL
                     AMAMNGLIILITWTDPRLNSPMYFFLGHLSFLDICFITTTIPQMLVHLVTKNHTVSFV
                     SCMTQMYLVFGVGVAECILLAFMAYDRYVAICHPLNYAQIISRQVCIRLVVISWVFGM
                     INGILLDYMTFRGPFCRENHIENFFCEAPIVIALSCGDPEFSLKVIFVDAIAVLLSPM
                     VLIVTSYARILASILRRASSSSGRGKTFSTCASHLTVVVFFYTSAMFSYMNPRSTHGP
                     DKDKPFSLLYTIITPMCNPVIYSFRNKEMKGAMGRALGRANLAQAESF"
     exon            311..3065
                     /gene="Olr1877"
                     /gene_synonym="RGD1560560"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtgcgtgtgc gtgcgtgtgc gtgtgtgtgt gtgtgtgtgt gtgtgtgtga gagagagaga
       61 gagagagaga gagagagaga ttactacagt tcacgatcta taaatgtcca atggatttgc
      121 agcgtaagtc attgcacctt tgctccaatg taaagatcga cagaaccaat gacttcacct
      181 gtgtctcagc tcacagaaaa gagtggatcc aacatcaggc gctctccctg gggtagcatc
      241 atgaggtctc ttctcttacc tgctgcagtg attccgtgac tcaccatttt agtcacggca
      301 acacaatgag cagaccccca aagggagacc cgaggaacgg cagcacagtg actgagttca
      361 tcctcgtggg ctttgagcac agctcccctt ccacccgggc actgctcttc accctcttcc
      421 tggctctcta cagcctcgcc atggccatga acggcctcat catcctcatc acatggactg
      481 accccaggct caacagcccc atgtacttct tcctcggaca cctgtctttc ctggacatct
      541 gcttcatcac caccaccatc ccacagatgt tggtccacct ggtgaccaag aaccacacgg
      601 tctcctttgt ctcttgcatg acccagatgt atctggtttt tggtgtgggt gtggccgagt
      661 gcatcctctt ggctttcatg gcctatgatc gttatgttgc catctgccac cctctgaatt
      721 acgctcagat cataagtcgt caggtgtgta tcaggctggt ggtgatttcc tgggtctttg
      781 ggatgatcaa tggcatcctt cttgattaca tgacattccg aggtccattc tgcagagaaa
      841 atcacataga aaacttcttc tgtgaggctc ccatagtgat cgccctctcc tgtggggacc
      901 cggagttcag tctgaaggtg atctttgttg atgccattgc ggtgttgctc agtcccatgg
      961 tgctcatcgt cacctcctat gcccgaatcc tggcctccat cctccgcagg gcctcctcct
     1021 cctcaggtag ggggaagaca ttctccactt gtgcctccca cctgaccgtg gttgtctttt
     1081 tctacacctc agctatgttc tcttacatga atccccgcag tacacatgga cctgacaaag
     1141 acaagccttt ctccctcctc tacaccatca tcacccccat gtgcaaccca gtcatctaca
     1201 gcttccgcaa caaggaaatg aagggggcca tggggagggc tcttgggaga gccaacctgg
     1261 ctcaggcaga gtccttttag cctgaaatta cttgaatgaa ttcagcctac tgaaaataga
     1321 agcttatccc cttcctagtc tttgttccca atgctggagg gctccaagaa agacgttcat
     1381 gtcttccttg gcagcagact cagatcttga agtaatttct cctgacgtct tgagttggct
     1441 cccagcataa actgagtctc tgatttctat tggtaatctg ttttcggggt tggagggaca
     1501 aatgcgatgt tacagggctt atgtcactaa ctgagaagag acaggcttgc tttacaagat
     1561 aaagcaatta gcataatctt agttagggtt ttattgcacg accacagtaa ctcttacaaa
     1621 gaaaaatact taactcgggc tgggttacgg ttcagaggtt tagtctatta ttgtcataac
     1681 aggaagcatc acaacatgct ggcagacatg atgctggaga aggatcagtg tcctacatcc
     1741 ggatcggcag gaagcaggaa gagaatcagc ttgagcatct agagctcaaa gccccacccc
     1801 cagtgacgca cttcctccaa caaagccaca cccactctaa caagaccaca cctcctaaca
     1861 gtgttgctcc ctacaggcct gtggaggcca tttttattca aatcaccgca agcataaaaa
     1921 ccaaaataat ttggagagct tttgcttagg gaacagaata gtttgaaagt caagatgtgg
     1981 aggcagtggg ttggaggaat attgtgcgag ggacgcagca tcccatccct gtgtggtggt
     2041 ccacaaattc tttaagttca caggaaaaaa gggggattaa tgagagtgga cttctattac
     2101 tttccaaacc cagtaagagg aggcacaaga ttttagatta acgccaagga aggagaatgg
     2161 aactagagcc aaaggctcaa ggcagcagcc tgtgcagctt gtgattgtga tttctgtacc
     2221 acagaaggcc ctacagccag gaactcttgg agggactcct accactcaac agtgtagagc
     2281 ggggctactt taaaacgttt gcacattctt tgctggtttc atcctcctgc cccagcttcg
     2341 gaaatagtga aaatgcattc acaagctacc acgcctgact ccacttgaag tttttaatca
     2401 ctgacctggt tgcaacattt aatgccttta tttccctctt aggctgggtc ctgctagctg
     2461 aatctttatt aatggctaca gtgagcttcc ttgtcattta gagtcttgtc attgcgttaa
     2521 cttaaggaac attgctggca gaacacaaga cagagagacg gtgtttaggt acacttattt
     2581 tttctggctc ctttgatcgc ccaggttctg cagccttgat ctcagggtca tagatatctc
     2641 tgttcccttt cctttcccct gaaggtgata tatggttgaa ttagaaacag atcatcaaca
     2701 tgcatggatt taaatctgca gttcaaatat ccctgcaaat atagaggcag acagacagac
     2761 agtttgatgt tactaaacaa tcaagaagaa aagtctgcct ttgaacattg ctatagccgg
     2821 gatcttggaa gaccataaag gcccatatgg taaggctttg ctatgttctc catctggaat
     2881 gttcctcaac aagctcctgc tttgaagact tggtccccgg cttgtggtac tgtgatgtca
     2941 gaaatttgga gcagagactg aaggaaaggt catccagaga gtgctccacc ttgggatcca
     3001 tcccatatac aatcagcaaa gccagacact attgtggatg ccaaggagtg catgcaggag
     3061 ggagc
//
