LOCUS       NM_001001109             939 bp    mRNA    linear   ROD 24-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor 1585 (Olr1585), mRNA.
ACCESSION   NM_001001109
VERSION     NM_001001109.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 939)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 939)
  AUTHORS   Gibbs,R.A., Weinstock,G.M., Metzker,M.L., Muzny,D.M.,
            Sodergren,E.J., Scherer,S., Scott,G., Steffen,D., Worley,K.C.,
            Burch,P.E., Okwuonu,G., Hines,S., Lewis,L., DeRamo,C., Delgado,O.,
            Dugan-Rocha,S., Miner,G., Morgan,M., Hawes,A., Gill,R., Celera,
            Holt,R.A., Adams,M.D., Amanatides,P.G., Baden-Tillson,H.,
            Barnstead,M., Chin,S., Evans,C.A., Ferriera,S., Fosler,C.,
            Glodek,A., Gu,Z., Jennings,D., Kraft,C.L., Nguyen,T.,
            Pfannkoch,C.M., Sitter,C., Sutton,G.G., Venter,J.C., Woodage,T.,
            Smith,D., Lee,H.M., Gustafson,E., Cahill,P., Kana,A.,
            Doucette-Stamm,L., Weinstock,K., Fechtel,K., Weiss,R.B., Dunn,D.M.,
            Green,E.D., Blakesley,R.W., Bouffard,G.G., De Jong,P.J.,
            Osoegawa,K., Zhu,B., Marra,M., Schein,J., Bosdet,I., Fjell,C.,
            Jones,S., Krzywinski,M., Mathewson,C., Siddiqui,A., Wye,N.,
            McPherson,J., Zhao,S., Fraser,C.M., Shetty,J., Shatsman,S.,
            Geer,K., Chen,Y., Abramzon,S., Nierman,W.C., Havlak,P.H., Chen,R.,
            Durbin,K.J., Simons,R., Ren,Y., Song,X.Z., Li,B., Liu,Y., Qin,X.,
            Cawley,S., Worley,K.C., Cooney,A.J., D'Souza,L.M., Martin,K.,
            Wu,J.Q., Gonzalez-Garay,M.L., Jackson,A.R., Kalafus,K.J.,
            McLeod,M.P., Milosavljevic,A., Virk,D., Volkov,A., Wheeler,D.A.,
            Zhang,Z., Bailey,J.A., Eichler,E.E., Tuzun,E., Birney,E.,
            Mongin,E., Ureta-Vidal,A., Woodwark,C., Zdobnov,E., Bork,P.,
            Suyama,M., Torrents,D., Alexandersson,M., Trask,B.J., Young,J.M.,
            Huang,H., Wang,H., Xing,H., Daniels,S., Gietzen,D., Schmidt,J.,
            Stevens,K., Vitt,U., Wingrove,J., Camara,F., Mar Alba,M.,
            Abril,J.F., Guigo,R., Smit,A., Dubchak,I., Rubin,E.M., Couronne,O.,
            Poliakov,A., Hubner,N., Ganten,D., Goesele,C., Hummel,O.,
            Kreitler,T., Lee,Y.A., Monti,J., Schulz,H., Zimdahl,H.,
            Himmelbauer,H., Lehrach,H., Jacob,H.J., Bromberg,S.,
            Gullings-Handley,J., Jensen-Seaman,M.I., Kwitek,A.E., Lazar,J.,
            Pasko,D., Tonellato,P.J., Twigger,S., Ponting,C.P., Duarte,J.M.,
            Rice,S., Goodstadt,L., Beatson,S.A., Emes,R.D., Winter,E.E.,
            Webber,C., Brandt,P., Nyakatura,G., Adetobi,M., Chiaromonte,F.,
            Elnitski,L., Eswara,P., Hardison,R.C., Hou,M., Kolbe,D., Makova,K.,
            Miller,W., Nekrutenko,A., Riemer,C., Schwartz,S., Taylor,J.,
            Yang,S., Zhang,Y., Lindpaintner,K., Andrews,T.D., Caccamo,M.,
            Clamp,M., Clarke,L., Curwen,V., Durbin,R., Eyras,E., Searle,S.M.,
            Cooper,G.M., Batzoglou,S., Brudno,M., Sidow,A., Stone,E.A.,
            Venter,J.C., Payseur,B.A., Bourque,G., Lopez-Otin,C., Puente,X.S.,
            Chakrabarti,K., Chatterji,S., Dewey,C., Pachter,L., Bray,N.,
            Yap,V.B., Caspi,A., Tesler,G., Pevzner,P.A., Haussler,D.,
            Roskin,K.M., Baertsch,R., Clawson,H., Furey,T.S., Hinrichs,A.S.,
            Karolchik,D., Kent,W.J., Rosenbloom,K.R., Trumbower,H.,
            Weirauch,M., Cooper,D.N., Stenson,P.D., Ma,B., Brent,M.,
            Arumugam,M., Shteynberg,D., Copley,R.R., Taylor,M.S., Riethman,H.,
            Mudunuri,U., Peterson,J., Guyer,M., Felsenfeld,A., Old,S.,
            Mockrin,S. and Collins,F.
  CONSRTM   Rat Genome Sequencing Project Consortium
  TITLE     Genome sequence of the Brown Norway rat yields insights into
            mammalian evolution
  JOURNAL   Nature 428 (6982), 493-521 (2004)
   PUBMED   15057822
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000013.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on computational evidence
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-939               JAXUCZ010000013.1  88594293-88595231
FEATURES             Location/Qualifiers
     source          1..939
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="13"
                     /map="13q24"
     gene            1..939
                     /gene="Olr1585"
                     /note="olfactory receptor 1585"
                     /db_xref="GeneID:406005"
                     /db_xref="RGD:1333297"
     CDS             1..939
                     /gene="Olr1585"
                     /note="olfactory receptor gene Olr1585"
                     /codon_start=1
                     /product="olfactory receptor Olr1585"
                     /protein_id="NP_001001109.1"
                     /db_xref="GeneID:406005"
                     /db_xref="RGD:1333297"
                     /translation="MDHVNCTWNWIFILAGFNTSGTLQQLAVFGTLCIYLLTLAGNLF
                     IIVLVQADSGLSTPMYFFISVLSFLEIWYVSTTVPTLLHTLLHGHSPIPSAACFIQLY
                     VFHSLGMTECYLLGVMALDRYLAICRPLHYHSLMSRQVQRELVLITWVAGFSAALVPA
                     GLTATLPYCLKEVAHYFCDLGPVMQLACVDTSWHARVYIAVIGMINTCNLVFILGLYG
                     GIVKAVLRLPSAASRAKAFSTCSSHITVVTLFFGSAFIVYVGPPEIRAEGRGKLIALV
                     YTLFTPFFNPIIYTLRNKEVKAAFKRVTQRIKGVLG"
     exon            1..939
                     /gene="Olr1585"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atggatcatg tcaattgcac ctggaactgg atcttcatcc ttgctggttt caatacctct
       61 ggcactctgc aacagcttgc agtctttggg accctgtgca tctatctcct cacacttgca
      121 gggaacttgt tcatcattgt cttggttcag gcagattcgg ggctgtccac tcccatgtac
      181 ttctttatca gtgtcctctc cttcctggaa atctggtatg tcagcaccac agtgcccacc
      241 ttgctgcata ccctgctcca cgggcattca cccatccctt cagctgcatg cttcatccag
      301 ctgtatgtct tccactcctt gggcatgact gagtgctacc tgttaggtgt catggctctg
      361 gaccgctacc ttgccatctg tcgcccattg cactaccatt ctctcatgag cagacaggta
      421 cagagagagc tagttctgat tacttgggtg gctggctttt cagctgccct ggtgcctgca
      481 ggtctcactg ccactttacc ctattgtttg aaagaggtag cccactattt ctgcgacctg
      541 ggaccagtga tgcagttggc atgtgtggac actagctggc atgctcgagt ttatattgca
      601 gtgattggca tgatcaatac atgcaatctc gttttcatct tgggactcta tggaggtatt
      661 gtgaaagctg tgctaaggct gccttcagct gccagtcgtg ccaaagcttt ctccacatgt
      721 tcctcccaca tcactgtagt gacactgttc tttggctctg ccttcattgt ctatgtaggg
      781 ccaccagaga ttcgagctga gggcagaggc aagcttattg ctttggtata taccttgttc
      841 acccctttct tcaaccctat catttatact cttcgcaata aggaagtgaa agcggctttc
      901 aagagggtca cacagaggat taagggtgtg ctgggttga
//
