LOCUS       NM_001000714             936 bp    mRNA    linear   ROD 26-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor 1520 (Olr1520), mRNA.
ACCESSION   NM_001000714
VERSION     NM_001000714.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 936)
  AUTHORS   Gibbs,R.A., Weinstock,G.M., Metzker,M.L., Muzny,D.M.,
            Sodergren,E.J., Scherer,S., Scott,G., Steffen,D., Worley,K.C.,
            Burch,P.E., Okwuonu,G., Hines,S., Lewis,L., DeRamo,C., Delgado,O.,
            Dugan-Rocha,S., Miner,G., Morgan,M., Hawes,A., Gill,R., Celera,
            Holt,R.A., Adams,M.D., Amanatides,P.G., Baden-Tillson,H.,
            Barnstead,M., Chin,S., Evans,C.A., Ferriera,S., Fosler,C.,
            Glodek,A., Gu,Z., Jennings,D., Kraft,C.L., Nguyen,T.,
            Pfannkoch,C.M., Sitter,C., Sutton,G.G., Venter,J.C., Woodage,T.,
            Smith,D., Lee,H.M., Gustafson,E., Cahill,P., Kana,A.,
            Doucette-Stamm,L., Weinstock,K., Fechtel,K., Weiss,R.B., Dunn,D.M.,
            Green,E.D., Blakesley,R.W., Bouffard,G.G., De Jong,P.J.,
            Osoegawa,K., Zhu,B., Marra,M., Schein,J., Bosdet,I., Fjell,C.,
            Jones,S., Krzywinski,M., Mathewson,C., Siddiqui,A., Wye,N.,
            McPherson,J., Zhao,S., Fraser,C.M., Shetty,J., Shatsman,S.,
            Geer,K., Chen,Y., Abramzon,S., Nierman,W.C., Havlak,P.H., Chen,R.,
            Durbin,K.J., Simons,R., Ren,Y., Song,X.Z., Li,B., Liu,Y., Qin,X.,
            Cawley,S., Worley,K.C., Cooney,A.J., D'Souza,L.M., Martin,K.,
            Wu,J.Q., Gonzalez-Garay,M.L., Jackson,A.R., Kalafus,K.J.,
            McLeod,M.P., Milosavljevic,A., Virk,D., Volkov,A., Wheeler,D.A.,
            Zhang,Z., Bailey,J.A., Eichler,E.E., Tuzun,E., Birney,E.,
            Mongin,E., Ureta-Vidal,A., Woodwark,C., Zdobnov,E., Bork,P.,
            Suyama,M., Torrents,D., Alexandersson,M., Trask,B.J., Young,J.M.,
            Huang,H., Wang,H., Xing,H., Daniels,S., Gietzen,D., Schmidt,J.,
            Stevens,K., Vitt,U., Wingrove,J., Camara,F., Mar Alba,M.,
            Abril,J.F., Guigo,R., Smit,A., Dubchak,I., Rubin,E.M., Couronne,O.,
            Poliakov,A., Hubner,N., Ganten,D., Goesele,C., Hummel,O.,
            Kreitler,T., Lee,Y.A., Monti,J., Schulz,H., Zimdahl,H.,
            Himmelbauer,H., Lehrach,H., Jacob,H.J., Bromberg,S.,
            Gullings-Handley,J., Jensen-Seaman,M.I., Kwitek,A.E., Lazar,J.,
            Pasko,D., Tonellato,P.J., Twigger,S., Ponting,C.P., Duarte,J.M.,
            Rice,S., Goodstadt,L., Beatson,S.A., Emes,R.D., Winter,E.E.,
            Webber,C., Brandt,P., Nyakatura,G., Adetobi,M., Chiaromonte,F.,
            Elnitski,L., Eswara,P., Hardison,R.C., Hou,M., Kolbe,D., Makova,K.,
            Miller,W., Nekrutenko,A., Riemer,C., Schwartz,S., Taylor,J.,
            Yang,S., Zhang,Y., Lindpaintner,K., Andrews,T.D., Caccamo,M.,
            Clamp,M., Clarke,L., Curwen,V., Durbin,R., Eyras,E., Searle,S.M.,
            Cooper,G.M., Batzoglou,S., Brudno,M., Sidow,A., Stone,E.A.,
            Venter,J.C., Payseur,B.A., Bourque,G., Lopez-Otin,C., Puente,X.S.,
            Chakrabarti,K., Chatterji,S., Dewey,C., Pachter,L., Bray,N.,
            Yap,V.B., Caspi,A., Tesler,G., Pevzner,P.A., Haussler,D.,
            Roskin,K.M., Baertsch,R., Clawson,H., Furey,T.S., Hinrichs,A.S.,
            Karolchik,D., Kent,W.J., Rosenbloom,K.R., Trumbower,H.,
            Weirauch,M., Cooper,D.N., Stenson,P.D., Ma,B., Brent,M.,
            Arumugam,M., Shteynberg,D., Copley,R.R., Taylor,M.S., Riethman,H.,
            Mudunuri,U., Peterson,J., Guyer,M., Felsenfeld,A., Old,S.,
            Mockrin,S. and Collins,F.
  CONSRTM   Rat Genome Sequencing Project Consortium
  TITLE     Genome sequence of the Brown Norway rat yields insights into
            mammalian evolution
  JOURNAL   Nature 428 (6982), 493-521 (2004)
   PUBMED   15057822
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000010.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-936               JAXUCZ010000010.1  59735433-59736368
FEATURES             Location/Qualifiers
     source          1..936
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q24"
     gene            1..936
                     /gene="Olr1520"
                     /note="olfactory receptor 1520"
                     /db_xref="GeneID:404963"
                     /db_xref="RGD:1332930"
     CDS             1..936
                     /gene="Olr1520"
                     /note="olfactory receptor gene Olr1520"
                     /codon_start=1
                     /product="olfactory receptor Olr1520"
                     /protein_id="NP_001000714.1"
                     /db_xref="GeneID:404963"
                     /db_xref="RGD:1332930"
                     /translation="MDGGNQSGDSEFLLLGLSEVPEHQRILFWTFLSMYLVTVVGNVL
                     IILAIGSDSHLHTPMYFFLANLSFTDLFFVTNTIPKMLVNLQSQNKAISYPGCLTQLF
                     FLVSLVALDNLILAVMAYDRYVAICRPLHYSTAMSPKLCILLLIFCWTLAILYGLIHT
                     LLMTRVTFCGARKIQYIFCEMYVLLRLACSDTYINHMVLIATGCFIFLVPFGFMIMSY
                     IWIVRAILRIPSASNKYKAFSTCASHLAVVALFYGTLGMVYLRPLHTYSMKDSVATVM
                     YAVVAPMMNPFIYSLRNKDMHGALGRLLKPLQKLT"
     exon            1..936
                     /gene="Olr1520"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atggatggag gcaaccagag tggggactct gagttcctac tcctggggct ctcggaggtt
       61 cctgaacatc agcgcatcct gttctggacc ttcctgtcca tgtacctggt cacagtggta
      121 gggaatgtgc tcatcatcct ggccattggc tctgactcgc acctgcacac gcccatgtac
      181 ttcttcctgg ccaacctctc cttcactgac ctcttctttg tcaccaacac tatccccaag
      241 atgctggtga accttcaatc ccagaacaaa gctatctcct acccaggatg tctgacacag
      301 ctcttcttcc tggtgtcttt ggtagccctg gacaatctca tcctggctgt aatggcatat
      361 gaccgttatg tggccatctg tcgccccctc cattattcta cggccatgag ccctaagctc
      421 tgtatcttgc ttctcatctt ctgctggaca ctagctatcc tctatggcct catacataca
      481 ctcctcatga ccagagtaac cttctgtggg gctcggaaaa tccaatacat cttctgtgaa
      541 atgtacgtcc tcctgaggct tgcatgctct gacacctaca tcaatcacat ggtgctgatt
      601 gccacaggct gcttcatctt ccttgttcct tttggattca tgatcatgtc ctacatctgg
      661 attgtcagag ctatcctcag aattccttca gcctctaaca agtacaaagc cttttccacc
      721 tgtgcgtccc atctggctgt ggtggctctc ttctatggga cgcttggtat ggtgtatctg
      781 agacccctgc acacctactc catgaaagac tcagtagcca ccgtgatgta tgcggtggtg
      841 gcacccatga tgaacccttt catctacagc ctgaggaaca aggacatgca tggggccctg
      901 ggaagactgc taaagccact tcagaagcta acatga
//
