LOCUS       NM_001000436             930 bp    mRNA    linear   ROD 26-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor 1198 (Olr1198), mRNA.
ACCESSION   NM_001000436 XM_236038
VERSION     NM_001000436.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 930)
  AUTHORS   Gibbs,R.A., Weinstock,G.M., Metzker,M.L., Muzny,D.M.,
            Sodergren,E.J., Scherer,S., Scott,G., Steffen,D., Worley,K.C.,
            Burch,P.E., Okwuonu,G., Hines,S., Lewis,L., DeRamo,C., Delgado,O.,
            Dugan-Rocha,S., Miner,G., Morgan,M., Hawes,A., Gill,R., Celera,
            Holt,R.A., Adams,M.D., Amanatides,P.G., Baden-Tillson,H.,
            Barnstead,M., Chin,S., Evans,C.A., Ferriera,S., Fosler,C.,
            Glodek,A., Gu,Z., Jennings,D., Kraft,C.L., Nguyen,T.,
            Pfannkoch,C.M., Sitter,C., Sutton,G.G., Venter,J.C., Woodage,T.,
            Smith,D., Lee,H.M., Gustafson,E., Cahill,P., Kana,A.,
            Doucette-Stamm,L., Weinstock,K., Fechtel,K., Weiss,R.B., Dunn,D.M.,
            Green,E.D., Blakesley,R.W., Bouffard,G.G., De Jong,P.J.,
            Osoegawa,K., Zhu,B., Marra,M., Schein,J., Bosdet,I., Fjell,C.,
            Jones,S., Krzywinski,M., Mathewson,C., Siddiqui,A., Wye,N.,
            McPherson,J., Zhao,S., Fraser,C.M., Shetty,J., Shatsman,S.,
            Geer,K., Chen,Y., Abramzon,S., Nierman,W.C., Havlak,P.H., Chen,R.,
            Durbin,K.J., Simons,R., Ren,Y., Song,X.Z., Li,B., Liu,Y., Qin,X.,
            Cawley,S., Worley,K.C., Cooney,A.J., D'Souza,L.M., Martin,K.,
            Wu,J.Q., Gonzalez-Garay,M.L., Jackson,A.R., Kalafus,K.J.,
            McLeod,M.P., Milosavljevic,A., Virk,D., Volkov,A., Wheeler,D.A.,
            Zhang,Z., Bailey,J.A., Eichler,E.E., Tuzun,E., Birney,E.,
            Mongin,E., Ureta-Vidal,A., Woodwark,C., Zdobnov,E., Bork,P.,
            Suyama,M., Torrents,D., Alexandersson,M., Trask,B.J., Young,J.M.,
            Huang,H., Wang,H., Xing,H., Daniels,S., Gietzen,D., Schmidt,J.,
            Stevens,K., Vitt,U., Wingrove,J., Camara,F., Mar Alba,M.,
            Abril,J.F., Guigo,R., Smit,A., Dubchak,I., Rubin,E.M., Couronne,O.,
            Poliakov,A., Hubner,N., Ganten,D., Goesele,C., Hummel,O.,
            Kreitler,T., Lee,Y.A., Monti,J., Schulz,H., Zimdahl,H.,
            Himmelbauer,H., Lehrach,H., Jacob,H.J., Bromberg,S.,
            Gullings-Handley,J., Jensen-Seaman,M.I., Kwitek,A.E., Lazar,J.,
            Pasko,D., Tonellato,P.J., Twigger,S., Ponting,C.P., Duarte,J.M.,
            Rice,S., Goodstadt,L., Beatson,S.A., Emes,R.D., Winter,E.E.,
            Webber,C., Brandt,P., Nyakatura,G., Adetobi,M., Chiaromonte,F.,
            Elnitski,L., Eswara,P., Hardison,R.C., Hou,M., Kolbe,D., Makova,K.,
            Miller,W., Nekrutenko,A., Riemer,C., Schwartz,S., Taylor,J.,
            Yang,S., Zhang,Y., Lindpaintner,K., Andrews,T.D., Caccamo,M.,
            Clamp,M., Clarke,L., Curwen,V., Durbin,R., Eyras,E., Searle,S.M.,
            Cooper,G.M., Batzoglou,S., Brudno,M., Sidow,A., Stone,E.A.,
            Venter,J.C., Payseur,B.A., Bourque,G., Lopez-Otin,C., Puente,X.S.,
            Chakrabarti,K., Chatterji,S., Dewey,C., Pachter,L., Bray,N.,
            Yap,V.B., Caspi,A., Tesler,G., Pevzner,P.A., Haussler,D.,
            Roskin,K.M., Baertsch,R., Clawson,H., Furey,T.S., Hinrichs,A.S.,
            Karolchik,D., Kent,W.J., Rosenbloom,K.R., Trumbower,H.,
            Weirauch,M., Cooper,D.N., Stenson,P.D., Ma,B., Brent,M.,
            Arumugam,M., Shteynberg,D., Copley,R.R., Taylor,M.S., Riethman,H.,
            Mudunuri,U., Peterson,J., Guyer,M., Felsenfeld,A., Old,S.,
            Mockrin,S. and Collins,F.
  CONSRTM   Rat Genome Sequencing Project Consortium
  TITLE     Genome sequence of the Brown Norway rat yields insights into
            mammalian evolution
  JOURNAL   Nature 428 (6982), 493-521 (2004)
   PUBMED   15057822
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000008.1.
            
            On Aug 30, 2004 this sequence version replaced XM_236038.2.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-930               JAXUCZ010000008.1  45764097-45765026
FEATURES             Location/Qualifiers
     source          1..930
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /map="8q22"
     gene            1..930
                     /gene="Olr1198"
                     /gene_synonym="ratchr8-39119585-39120514_ORF"
                     /note="olfactory receptor 1198"
                     /db_xref="GeneID:300525"
                     /db_xref="RGD:1333870"
     CDS             1..930
                     /gene="Olr1198"
                     /gene_synonym="ratchr8-39119585-39120514_ORF"
                     /note="olfactory receptor gene Olr1198"
                     /codon_start=1
                     /product="olfactory receptor Olr1198"
                     /protein_id="NP_001000436.1"
                     /db_xref="GeneID:300525"
                     /db_xref="RGD:1333870"
                     /translation="MTVKNSSVTEFILAGLTDQPGLRLPLFFLFLGFYMVTVVGNLGL
                     IFLIGLNSHLHTPMYFFLFNLSVVDFCFSSTIIPKMLMSFISKKNIISHSGCMTQLFF
                     FCFFVVSETFILSAMAYDRYVAICNPLMYTVTMSPQVCLLLLLGAYVMGFSEAMAHTG
                     NLMNLTFCADNLVNHFMCDILPLLELSCNSTFINELVVFIVVAIDIAVPIVSIFISYA
                     LILSSILRMHSTEGRSKAFSTCSSHLIVVCLLFGSGAFMYLKPPSILPLDQGKVSSLF
                     YTIVVPMLNPLIYSLRNKDVKVALRKTLGKIIL"
     exon            1..930
                     /gene="Olr1198"
                     /gene_synonym="ratchr8-39119585-39120514_ORF"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgactgtca agaattcctc tgtgacagag ttcatcctcg caggtctgac agaccagcca
       61 ggactccgcc tgcccctctt ctttctcttt ctaggtttct acatggtgac tgtggtgggg
      121 aacctgggct tgatcttcct gatagggctg aactctcacc tgcacacccc tatgtacttc
      181 tttctcttca atctttctgt agtagatttc tgtttttcct ccaccatcat ccctaaaatg
      241 ctcatgagtt ttatctcaaa gaagaacatc atctcacact cagggtgtat gacacagttg
      301 tttttcttct gtttctttgt tgtctctgag accttcattc tgtcagccat ggcatatgac
      361 cgttatgttg ccatctgtaa ccccctgatg tacacagtca ccatgtctcc ccaggtttgt
      421 ttactccttt tactaggagc ctatgtgatg ggtttctctg aggccatggc ccatacaggg
      481 aacctaatga atctgacctt ctgtgctgac aaccttgtca accacttcat gtgtgacatc
      541 cttcctcttc ttgagctctc ctgcaacagc accttcataa atgagctggt agtctttatt
      601 gtggtggcca ttgatattgc tgtgcccatt gtctccatct tcatttcgta tgccctcatc
      661 ctctctagca ttcttcgcat gcattccacg gagggcagat ccaaggcctt cagcacctgc
      721 agctcccact tgattgtggt ttgtctgtta tttggttctg gggctttcat gtatctcaag
      781 ccaccttcca ttttgcccct tgaccaagga aaagtttctt ccttgttcta tacaattgtg
      841 gtgcccatgt tgaacccttt gatctatagt ctgagaaata aggatgtcaa agttgctctg
      901 aggaaaacct tgggtaagat aatactttaa
//
