LOCUS       NM_001013192            2949 bp    mRNA    linear   ROD 05-JUN-2024
DEFINITION  Rattus norvegicus olfactomedin-like 1 (Olfml1), mRNA.
ACCESSION   NM_001013192 XM_341899
VERSION     NM_001013192.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2949)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 2949)
  AUTHORS   Gerhard,D.S., Wagner,L., Feingold,E.A., Shenmen,C.M., Grouse,L.H.,
            Schuler,G., Klein,S.L., Old,S., Rasooly,R., Good,P., Guyer,M.,
            Peck,A.M., Derge,J.G., Lipman,D., Collins,F.S., Jang,W., Sherry,S.,
            Feolo,M., Misquitta,L., Lee,E., Rotmistrovsky,K., Greenhut,S.F.,
            Schaefer,C.F., Buetow,K., Bonner,T.I., Haussler,D., Kent,J.,
            Kiekhaus,M., Furey,T., Brent,M., Prange,C., Schreiber,K.,
            Shapiro,N., Bhat,N.K., Hopkins,R.F., Hsie,F., Driscoll,T.,
            Soares,M.B., Casavant,T.L., Scheetz,T.E., Brown-stein,M.J.,
            Usdin,T.B., Toshiyuki,S., Carninci,P., Piao,Y., Dudekula,D.B.,
            Ko,M.S., Kawakami,K., Suzuki,Y., Sugano,S., Gruber,C.E.,
            Smith,M.R., Simmons,B., Moore,T., Waterman,R., Johnson,S.L.,
            Ruan,Y., Wei,C.L., Mathavan,S., Gunaratne,P.H., Wu,J., Garcia,A.M.,
            Hulyk,S.W., Fuh,E., Yuan,Y., Sneed,A., Kowis,C., Hodgson,A.,
            Muzny,D.M., McPherson,J., Gibbs,R.A., Fahey,J., Helton,E.,
            Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M.,
            Madari,A., Young,A.C., Wetherby,K.D., Granite,S.J., Kwong,P.N.,
            Brinkley,C.P., Pearson,R.L., Bouffard,G.G., Blakesly,R.W.,
            Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J.,
            Myers,R.M., Butterfield,Y.S., Griffith,M., Griffith,O.L.,
            Krzywinski,M.I., Liao,N., Morin,R., Palmquist,D., Petrescu,A.S.,
            Skalska,U., Smailus,D.E., Stott,J.M., Schnerch,A., Schein,J.E.,
            Jones,S.J., Holt,R.A., Baross,A., Marra,M.A., Clifton,S.,
            Makowski,K.A., Bosak,S. and Malek,J.
  CONSRTM   MGC Project Team
  TITLE     The status, quality, and expansion of the NIH full-length cDNA
            project: the Mammalian Gene Collection (MGC)
  JOURNAL   Genome Res 14 (10B), 2121-2127 (2004)
   PUBMED   15489334
  REMARK    Erratum:[Genome Res. 2006 Jun;16(6):804. Morrin, Ryan [corrected to
            Morin, Ryan]]
REFERENCE   3  (bases 1 to 2949)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC081972.1.
            
            On Mar 1, 2018 this sequence version replaced NM_001013192.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC081972.1, FM129944.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5756307, SAMEA5760383
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-2949              BC081972.1         5-2953
FEATURES             Location/Qualifiers
     source          1..2949
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q33"
     gene            1..2949
                     /gene="Olfml1"
                     /note="olfactomedin-like 1"
                     /db_xref="GeneID:361621"
                     /db_xref="RGD:1311854"
     exon            1..432
                     /gene="Olfml1"
                     /inference="alignment:Splign:2.1.0"
     CDS             304..1512
                     /gene="Olfml1"
                     /note="olfactomedin-like protein 1"
                     /codon_start=1
                     /product="olfactomedin-like protein 1 precursor"
                     /protein_id="NP_001013210.1"
                     /db_xref="GeneID:361621"
                     /db_xref="RGD:1311854"
                     /translation="MMVALPGASASLVLFLAAFLPPLQHAQDPAMVHYIYQRFQVLEQ
                     GLEKCAQTTRAYIQDFQEFSKNLSTMLGRCQTHTNEYRSAVDNLALRVERAQREIDYL
                     QYLRESDFCVESEEKTSAEKVLQEAEEEKKIRTLLNTSCDNMLMAIKSLKIVKKTVDP
                     EGSWMKDAGSTSAKVYLLAGSRNNTVWEFANLRAFMEDSVKPGPRKLTLPLSWQGSGQ
                     VVYQSFLFFHNQGTSNEIIKYNLQKKTVEDRMLLPGGAGRAPIYQHSLSTYIDLAVDE
                     HGLWAIHSGPGIQGHLVLTKIEAGTLGIEHSWDTPCRSQDAEASFLLCGVLYVVYSSG
                     GQGPHRITCVYDPLGTVREEHLPNLFFPRRARSHSMIHYNPRDKQLYAWNEGYQIIYK
                     LQTKKKLPLE"
     exon            433..721
                     /gene="Olfml1"
                     /inference="alignment:Splign:2.1.0"
     exon            722..2922
                     /gene="Olfml1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ccactagcct gagagggtct gtgcatgtcc aagctgaggg cagcagatgc tggacctcgg
       61 gagccctctg caccaagtga acaaggcagg cctgcagaga ccagcttgcc aacagctgga
      121 cttgatcacc agcttgaagc tgagatcatg cactgggtag aataacaagc ggactttgtt
      181 ctctctggct atgcaaagtg ttgttttcca aggaattgcc acagcagcag acagaaaacc
      241 agagctcacc acctggaccc ttgagtcatt tcagagaacc aaagttcctg ggaagtgtgc
      301 aggatgatgg tggcccttcc gggagcttct gcttcactgg ttctctttct cgcagcattt
      361 ctgcccccac tacaacatgc ccaggaccca gccatggtac actacatcta ccagcgcttc
      421 caagtcttgg agcaagggct ggaaaaatgt gcccaaacaa caagggccta tattcaagat
      481 ttccaggaat tctcaaaaaa cctatccacc atgctgggga ggtgtcagac ccacacgaat
      541 gagtacagga gtgcagtgga taaccttgcc ctgagagtgg agcgtgccca gcgggagatc
      601 gactacctgc aatacctcag ggaatctgac ttctgcgttg aatcggagga gaagacatca
      661 gctgaaaagg tgcttcaaga agcagaagaa gaaaagaaga tccgaaccct gttgaacaca
      721 agctgtgaca acatgctaat ggctataaag tctctgaaaa tagtgaagaa gaccgtggac
      781 ccagagggct cttggatgaa ggatgctggc agtacctctg ctaaagtgta tctattagct
      841 ggatccagaa acaacacagt ttgggaattt gcaaacttgc gggccttcat ggaagatagt
      901 gtgaagcctg gtccccggaa gctaacctta ccactttcct ggcagggatc agggcaagtg
      961 gtctaccaga gtttcctatt ttttcacaat caaggaactt ctaatgagat aattaaatat
     1021 aatctgcaga agaagactgt ggaagatcga atgcttcttc caggaggggc aggccgagca
     1081 cccatctacc aacactccct ctctacatac attgaccttg ctgtggatga acatggactg
     1141 tgggccattc actcaggacc aggtatccaa ggccatttgg ttctcacaaa aattgaggct
     1201 ggcactttag gaatagagca ttcatgggat acgccgtgta gaagccagga tgctgaagca
     1261 tcattcctcc tgtgtggggt cctctatgtt gtctacagtt ccggtggcca gggccctcat
     1321 cgaatcacct gtgtctatga cccactgggc actgtcaggg aggagcatct gcccaatttg
     1381 ttcttcccta ggcgggcaag gagtcactcc atgatccatt acaaccccag agataagcag
     1441 ctgtatgcct ggaatgaagg ctatcagatc atttacaaac tccagacaaa gaaaaaactg
     1501 cctctggagt aatggacagc agtttgcaga aagagttgtg tggcttaggc agtggttttt
     1561 ccgggacact gaggtcatgg cccctttaca ttggagtatc ataggaatga gttctaaaat
     1621 ttaaaataca tattctttct ttctcaaatg ttaccgcctt aggtatcttt tgagagcata
     1681 gatgaggtca caatttagac caataccttg ccctcaccca aatctgatgg ggattaaggt
     1741 ctcttccatc tggtttagtt atttccaatc cttccttttt tctttcagca ttttctctga
     1801 ctctgcccta tttcttatcc agcaactagg atcttgcccg tcctggtgtt gacttcttct
     1861 ctggacttca ctcaggctct gttctctttt tcaaatgctt ataaagattt ttcattgtcc
     1921 aactgtacat ttcttgttgc tgacaagaag caacttaaga gagaaagggt ttataccagc
     1981 ttattgtttt aaaagaagcc aggcacagtg gtgcacacct tttaccctgg tctccaggaa
     2041 gcttaggaag gtggatctct gtgtgtttga ggtcaacctg gtctacatgg taagttccag
     2101 ggccaacagg gcaatacagt gagcgcttgt cttaaaaaaa aatggatata gtccaccata
     2161 gtagtagtga aagtatggta gcaggagcat cagatgttca agtcacatct gtaatcagga
     2221 tgcaggaagc aaacaggaag aaaggctaca tacactaaga aacttaaagg cttgctctca
     2281 tagtaacgca ctactcgtca tagtgacaca agacctgcat tcagctggga accaagcgtt
     2341 catgtgagct tctggggcac atactcatcg gaccacaaca cccaggaaac actatttctt
     2401 cttggtgcct aatttttatt tcctctagcc ttgctcttct gtcaagccaa gtggatacag
     2461 taacagtgtg aaatcatgaa tagttggatg ttactttcta gttacaaagc tctttttaca
     2521 ttgtttaatt gtcttttctc tttgtcaggt ttgtacacat cttcatagtt gctaagttag
     2581 aggtgagagt tcaggtgagt tattcaaagt agcaaactac aaaagagcta gaaagactgc
     2641 aaacctctta gtatttccat catccaagaa aggaaatatc aattaggcac ttttcccact
     2701 tatccttaat cagtgtgtcc atcagttcag cctaaaaata acactctgcc ccttagccag
     2761 ttttcatgta tgcacaacgt cttatatata ggtctttcaa agtctgcttt atctaaaaaa
     2821 ccagtccaag gtaaggatgc aattctagcc tcatcttgtt tttttgttgc ctgcttcttt
     2881 cttcttgctt tcagtgtaat aaaagtgaga ttaagcagat aaaaaaaaaa aaaaaaaaaa
     2941 aaaaaaaaa
//
