LOCUS       NM_001346423            2636 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus Opa interacting protein 5 (Oip5), mRNA.
ACCESSION   NM_001346423 XR_085783 XR_086203
VERSION     NM_001346423.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2636)
  AUTHORS   Yu,W., Zheng,Z., Wei,W., Li,L., Zhang,Y., Sun,Y., Cao,J., Zang,W.
            and Shao,J.
  TITLE     Raf1 interacts with OIP5 to participate in oxaliplatin-induced
            neuropathic pain
  JOURNAL   Life Sci 281, 119804 (2021)
   PUBMED   34229010
  REMARK    GeneRIF: Raf1 interacts with OIP5 to participate in
            oxaliplatin-induced neuropathic pain.
REFERENCE   2  (bases 1 to 2636)
  AUTHORS   Naetar,N., Hutter,S., Dorner,D., Dechat,T., Korbei,B., Gotzmann,J.,
            Beug,H. and Foisner,R.
  TITLE     LAP2alpha-binding protein LINT-25 is a novel chromatin-associated
            protein involved in cell cycle exit
  JOURNAL   J Cell Sci 120 (Pt 5), 737-747 (2007)
   PUBMED   17284516
REFERENCE   3  (bases 1 to 2636)
  AUTHORS   Fujita,Y., Hayashi,T., Kiyomitsu,T., Toyoda,Y., Kokubu,A., Obuse,C.
            and Yanagida,M.
  TITLE     Priming of centromere for CENP-A recruitment by human hMis18alpha,
            hMis18beta, and M18BP1
  JOURNAL   Dev Cell 12 (1), 17-30 (2007)
   PUBMED   17199038
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000003.1 and BC167069.1.
            
            On or before Oct 12, 2016 this sequence version replaced
            XR_085783.5, XR_086203.5.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC167069.1, SRR26643293.18223.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN16676784 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1174              JAXUCZ010000003.1  127047559-127048732 c
            1175-2635           BC167069.1         1-1461
            2636-3809           JAXUCZ010000003.1  127047559-127048732 c
FEATURES             Location/Qualifiers
     source          1..2636
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q35"
     gene            1..2636
                     /gene="Oip5"
                     /gene_synonym="RGD1564263"
                     /note="Opa interacting protein 5"
                     /db_xref="GeneID:499873"
                     /db_xref="RGD:1564263"
     exon            1..305
                     /gene="Oip5"
                     /gene_synonym="RGD1564263"
                     /inference="alignment:Splign:2.1.0"
     CDS             8..721
                     /gene="Oip5"
                     /gene_synonym="RGD1564263"
                     /codon_start=1
                     /product="protein Mis18-beta"
                     /protein_id="NP_001333352.1"
                     /db_xref="GeneID:499873"
                     /db_xref="RGD:1564263"
                     /translation="MATLSPRGLPVVETQSCSGSCDTPFSSSMEWDTQVVEGFSPLGS
                     SGSEVKASPVDLRLPAWLKPERCAVFHCASCYAVLGDTVHLAWDLSKFLGALAFSRVT
                     NNVVLLEPLLVGIEGSLKSSTYNLLFCNSCGTPVGFHLYSTRAALAALRGHFCLSCDK
                     MLCYLLKTKAIVNTSEMDIYNVPLPEKIAELKEKIMLMHSRLNSLLRVLKEKTPPQSD
                     QENRTSNKQGNNTILGFIE"
     exon            306..372
                     /gene="Oip5"
                     /gene_synonym="RGD1564263"
                     /inference="alignment:Splign:2.1.0"
     exon            373..495
                     /gene="Oip5"
                     /gene_synonym="RGD1564263"
                     /inference="alignment:Splign:2.1.0"
     exon            496..577
                     /gene="Oip5"
                     /gene_synonym="RGD1564263"
                     /inference="alignment:Splign:2.1.0"
     exon            578..689
                     /gene="Oip5"
                     /gene_synonym="RGD1564263"
                     /inference="alignment:Splign:2.1.0"
     exon            690..2636
                     /gene="Oip5"
                     /gene_synonym="RGD1564263"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tcgaaaaatg gcgactcttt cgccgcgcgg tctccctgtc gtcgagaccc agtcctgtag
       61 tggctcttgt gatacacctt tttcttcctc catggagtgg gacactcagg tggtggaagg
      121 gttctcccct ctcgggtctt ccgggtctga ggtgaaggcg tcacctgtcg acctgcggct
      181 gcctgcgtgg ttgaagccgg agagatgtgc ggtgtttcat tgcgcgagtt gctacgcggt
      241 gctcggcgac actgtgcacc tcgcctggga cctatcgaag ttcctcggcg ccctggcctt
      301 ttccagagtc acaaacaacg tcgttttgtt agagcccctt ttggttggca tagaaggttc
      361 tctcaaatcc agcacataca accttttatt ctgtaactcc tgtgggactc ctgttggttt
      421 ccatttatat tctacccgtg ctgctctggc tgccttgaga ggccatttct gcctttcttg
      481 tgataaaatg ctgtgctatc tgttaaaaac aaaggccata gtaaatacat ctgagatgga
      541 tatttacaat gtacctttac cagaaaagat tgcagagctg aaagagaaga taatgctgat
      601 gcattctcgt ttaaactcac tgctgagggt tctgaaggaa aagactcctc ctcagtctga
      661 ccaggaaaat agaacaagca acaagcaagg aaacaacaca atcttggggt tcatagaatg
      721 atcaaagatc ctgcagcacg tgactctatt actttaaatt tattttacta tgttgattcc
      781 ataatgctta tttctgaaaa tgtatttcac tactaataac taattagcat gcagtgtccc
      841 ttgtgtccac tgacgaacag aatgaacaga tggcctggat aaagaaatgg agttaataga
      901 gatggtactt ctacgtgcca gttatatgaa tacttataaa tacttgttta tttgttttga
      961 aacaaggtct ctctctatag ctttggctgt cctggaactt tctatgtaga ccagggtagc
     1021 cttaaagtta tacagatcta cattcctctg cttcctctgc tagaattaaa gaagaatgtc
     1081 accaagacat catttttgtt tatgtaaaat agatatgtac attggatggt ggcggtgcat
     1141 gcttttaacc ccaacactct ggaggcagaa gtaggcgatc tttcaattca aggccagcct
     1201 gatctacaga gtgagttcta ggacagctag gcctacatag agaaaccctg tctggaacaa
     1261 aacaacaaat atatatgtaa taagtaacag ttaagaaata gaatgcatgc acaataaaca
     1321 atttgtatct ttttgctgtt gtttttaggt agggtctcat ttgtaatccc cactttgaaa
     1381 ggttatgtgg accaggctgg ccttgcacag agatctacct gtctttgcct cctagatttt
     1441 gagattaaag atgtgcacca cactcctgtt tggcctgcag aagctgtcag atccctcccc
     1501 tggaactgga attatcggca gttaagggta ttggaaactg aaccctaggt ctctgaaata
     1561 gcagtaagtg tacttacctg ctgagccatc tctccagcct cacagaccgg gacttaataa
     1621 attcataata cggggttggg gatttggctc agtggcagag cgcttgccta ggaagcgcaa
     1681 ggccctgggt tcggtcccca gctccgaaaa aaagaaccaa aaaaataaat aaataaattc
     1741 ataatacatt gaataattct tgagacagga tctttctctg tagcctagac tggcctccaa
     1801 tgtagcaatt ctacctcagc ttcctgagtg cttagtggcc taccatgctc gactgtggat
     1861 ttttaaaaca catatgtaac ttaacattaa catactttat caaagtttaa aaacttacgt
     1921 catcgtgtgt atgttactag ggcctcatac acagtatgtt aaggctcttc tacttagcta
     1981 catctctcat ctaataactt tttcttaact tccggatttg ccgttttaga tgggactttc
     2041 tatagaaaat taagttgttg agcttgaggc agattaaggt ggacagtagg tttgtgttaa
     2101 gatatttatg tgtgtgtcca gtaaatattt tgtggcaaac atttccttta aaaataaaat
     2161 attagtacat gtcgaagtca gaggacaacg agcagacgtc agttatgtcc tgcactttga
     2221 gtccagagga ttgaactaag attgtcaggc tggtagctca gcccctttaa ttgctcaagt
     2281 agcttgctgt ctcttccttt tttatttcta aattaggtat ttctttttct tttaaattaa
     2341 catttatgtg tggctcacac ggtctcagag gcttagttcc ctgaggagat ggtcaatggg
     2401 gcagaaagac attttcttct gtcaaggtaa acagccctaa agaagcttac tgggtcacac
     2461 acatacgaaa gaaatgaaag caaaggggag ctatgggaaa agtaactttt tggaatagga
     2521 tgggggaggg gatgtgaata tgatccaagt atagtgtata tatatgtata tgaaaagaac
     2581 ataaaaccca gtgtatatat atgctaataa aaactttaaa agatacattt ctttca
//
