LOCUS       NM_001013976            1340 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus 2-oxoglutarate and iron-dependent oxygenase
            domain containing 3 (Ogfod3), mRNA.
ACCESSION   NM_001013976 XM_221220
VERSION     NM_001013976.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1340)
  AUTHORS   Ghosh,D., Lippert,D., Krokhin,O., Cortens,J.P. and Wilkins,J.A.
  TITLE     Defining the membrane proteome of NK cells
  JOURNAL   J Mass Spectrom 45 (1), 1-25 (2010)
   PUBMED   19946888
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC088238.1.
            
            On Apr 20, 2005 this sequence version replaced XM_221220.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC088238.1, FQ225392.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMD00132261,
                                           SAMD00132262 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1340
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q32.3"
     gene            1..1340
                     /gene="Ogfod3"
                     /gene_synonym="RGD1305007"
                     /note="2-oxoglutarate and iron-dependent oxygenase domain
                     containing 3"
                     /db_xref="GeneID:303749"
                     /db_xref="RGD:1305007"
     exon            1..207
                     /gene="Ogfod3"
                     /gene_synonym="RGD1305007"
                     /inference="alignment:Splign:2.1.0"
     CDS             134..1081
                     /gene="Ogfod3"
                     /gene_synonym="RGD1305007"
                     /note="PKHD domain-containing transmembrane protein
                     C17orf101 homolog"
                     /codon_start=1
                     /product="2-oxoglutarate and iron-dependent oxygenase
                     domain-containing protein 3"
                     /protein_id="NP_001013998.1"
                     /db_xref="GeneID:303749"
                     /db_xref="RGD:1305007"
                     /translation="MAPQRRGPPRVPEGNSAAERRHANSTKKDRLPQEAQRTWLRIVA
                     LGVSLALVTFLLWSSAGIDDDVAEVVAHRGEVLEGRFIEVPCSEDYDGHRRFEGCTPR
                     KCGRGVTDIVITREEAEQIRRIAEKGLSLGGSDGGASILDLHSGALSVGKHFVNLYRY
                     FGDKIQTIFSEEDFQLYRDIRQKVQLTIAEAFGIRASLLYLTKPTFFSRINSTEAQTA
                     HDEYWHAHVDKVTYGSFDYTSLLYLSDYLEDFGGGRFVFMEEGSNKTVEPRAGRVSFF
                     TSGSENLHRVEKVLWGTRYAITIAFTCNPDHGIEDPVLT"
     exon            208..425
                     /gene="Ogfod3"
                     /gene_synonym="RGD1305007"
                     /inference="alignment:Splign:2.1.0"
     exon            426..501
                     /gene="Ogfod3"
                     /gene_synonym="RGD1305007"
                     /inference="alignment:Splign:2.1.0"
     exon            502..544
                     /gene="Ogfod3"
                     /gene_synonym="RGD1305007"
                     /inference="alignment:Splign:2.1.0"
     exon            545..609
                     /gene="Ogfod3"
                     /gene_synonym="RGD1305007"
                     /inference="alignment:Splign:2.1.0"
     exon            610..666
                     /gene="Ogfod3"
                     /gene_synonym="RGD1305007"
                     /inference="alignment:Splign:2.1.0"
     exon            667..820
                     /gene="Ogfod3"
                     /gene_synonym="RGD1305007"
                     /inference="alignment:Splign:2.1.0"
     exon            821..944
                     /gene="Ogfod3"
                     /gene_synonym="RGD1305007"
                     /inference="alignment:Splign:2.1.0"
     exon            945..1315
                     /gene="Ogfod3"
                     /gene_synonym="RGD1305007"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cgcgagccgg ccgaggaccg agcgcgtcgc tcccgcgtcc ctacaccgtt cccgcctcgc
       61 tttcgcggtc gcagctattg ccccgagttt ggtggttctc gtgtcccgcc tggctctgcg
      121 acggcttcgc ccgatggcgc ctcagcggag aggaccaccc agagttcccg aaggaaatag
      181 tgcagcagaa cgccggcacg cgaacagcac caagaaggac cggctgcctc aggaggcaca
      241 gaggacatgg ctaaggattg tggcccttgg ggtcagcctt gctctggtca cattcctgct
      301 ctggagtagt gcagggatcg atgatgatgt tgctgaagtt gtggcccatc gtggtgaggt
      361 cctagaaggc aggttcattg aggttccctg ctctgaggac tatgacggtc accgaaggtt
      421 tgaaggctgc acccccagga agtgtggccg aggtgtcact gacatcgtca tcaccaggga
      481 ggaggcggag cagattcgca gaatagcaga gaaagggctc tccctaggtg gatcggatgg
      541 aggggcatct atcctggact tgcactcggg agccctgtct gttgggaaac actttgtgaa
      601 cctgtataga tactttgggg ataaaataca aactatcttc tccgaggagg actttcagtt
      661 atatagggac attcggcaga aggtccagct caccattgct gaagctttcg gcatccgtgc
      721 atccttgttg tatctgacaa agcccacatt cttctcccga ataaatagca cagaagccca
      781 gacggctcac gacgagtact ggcatgcaca cgtggacaag gtgacctacg gctcttttga
      841 ctacacttcg ctgctttacc tatcggatta cttagaggac ttcggtggag ggcgctttgt
      901 gttcatggag gaagggtcca acaagacagt ggagcccaga gctggtcgag tctcattctt
      961 tacttcaggt tctgagaacc tgcaccgagt ggagaaagtc ctctggggca cccgctacgc
     1021 catcaccatc gctttcacct gcaaccccga ccacggcatc gaggacccag tactcacgtg
     1081 accagctagg tcgtgtactg agtaccatgt ctggaagcct gttcacgaca ccctagtgtt
     1141 gcgatacagc cctgtcggcg aaggcactcc taggccgggt tgagtgtgtg ctcatctctc
     1201 ccatttcagc ccattgctgc tgcccaaagt gccttatgaa ttgccctgag ttttatttga
     1261 tctgctgatg ttttaatctt ttcatctgtg agtaaatcaa ggaaggagcc tgttaaaaaa
     1321 aaaaaaaaaa aaaaaaaaaa
//
