LOCUS       NM_001107049            2215 bp    mRNA    linear   ROD 26-FEB-2024
DEFINITION  Rattus norvegicus outer dynein arm docking complex subunit 4
            (Odad4), mRNA.
ACCESSION   NM_001107049 XM_001081460 XM_220974
VERSION     NM_001107049.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2215)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473948.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_220974.4, XM_001081460.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC162060.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2215
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q31"
     gene            1..2215
                     /gene="Odad4"
                     /gene_synonym="RGD1311859; Ttc25"
                     /note="outer dynein arm docking complex subunit 4"
                     /db_xref="GeneID:303534"
                     /db_xref="RGD:1311859"
     exon            1..235
                     /gene="Odad4"
                     /gene_synonym="RGD1311859; Ttc25"
                     /inference="alignment:Splign:2.1.0"
     CDS             116..2053
                     /gene="Odad4"
                     /gene_synonym="RGD1311859; Ttc25"
                     /note="tetratricopeptide repeat protein 25;
                     tetratricopeptide repeat domain 25"
                     /codon_start=1
                     /product="outer dynein arm-docking complex subunit 4"
                     /protein_id="NP_001100519.1"
                     /db_xref="GeneID:303534"
                     /db_xref="RGD:1311859"
                     /translation="MTMSDGEADNLRSTFPSYMAEGERLYLCGEFSKAIQSFSNALHL
                     QSGDKNCLVARSKCYLKMGDLEKSLEDAEASLQNDPTFCKGILQKAETLYTMGDFEFA
                     LVFYHRGYKLRPDREFKVGIQKAQEAINNSVGSPSSIKLENKGDLSFLSKQAESKKAQ
                     QKHPPVKHLLSSTKHEIKRKGSLKSEKTIRQLLGELYVDKEYLEKLLLDEDLIKGTIK
                     SGLTVEELIMTGINYLDTRSNFWRQQKPIYARERDRKLMQEKWLRDRKRSPSQTAHYI
                     LKSLEDIDMLLTSGSAEGSLQKAEKVLKKVLEWNQDEVPNKDELVGNLYSCIGNAQIE
                     LGQMVAALQSHRKDLEIAKEHDLPDAKSRALDNIGRVFARVGKFQQAIDTWEEKIPLA
                     KTTLEKTWLFHEIGRCYLELDQAWQAQSYGEKSQQYAEEEGDLEWQLNASVLVAQAQV
                     KLRDFESAVNNFEKALERAKLVHNNEAQQAIISALDDANKGIIEELKKTNYREILREK
                     AERQDISSQMEFSGASEKETRRGREEQERVVKQWERELESEREATEDEEGSKQRLLRV
                     EEQDGSSSGLTSSKMMLGDTPSTSQMMRRESREIYRRISEDSTQPTLDDISQNQEKPS
                     ETAMEERLEKTEEDESKSETI"
     exon            236..367
                     /gene="Odad4"
                     /gene_synonym="RGD1311859; Ttc25"
                     /inference="alignment:Splign:2.1.0"
     exon            368..518
                     /gene="Odad4"
                     /gene_synonym="RGD1311859; Ttc25"
                     /inference="alignment:Splign:2.1.0"
     exon            519..580
                     /gene="Odad4"
                     /gene_synonym="RGD1311859; Ttc25"
                     /inference="alignment:Splign:2.1.0"
     exon            581..746
                     /gene="Odad4"
                     /gene_synonym="RGD1311859; Ttc25"
                     /inference="alignment:Splign:2.1.0"
     exon            747..971
                     /gene="Odad4"
                     /gene_synonym="RGD1311859; Ttc25"
                     /inference="alignment:Splign:2.1.0"
     exon            972..1179
                     /gene="Odad4"
                     /gene_synonym="RGD1311859; Ttc25"
                     /inference="alignment:Splign:2.1.0"
     exon            1180..1266
                     /gene="Odad4"
                     /gene_synonym="RGD1311859; Ttc25"
                     /inference="alignment:Splign:2.1.0"
     exon            1267..1463
                     /gene="Odad4"
                     /gene_synonym="RGD1311859; Ttc25"
                     /inference="alignment:Splign:2.1.0"
     exon            1464..1564
                     /gene="Odad4"
                     /gene_synonym="RGD1311859; Ttc25"
                     /inference="alignment:Splign:2.1.0"
     exon            1565..1649
                     /gene="Odad4"
                     /gene_synonym="RGD1311859; Ttc25"
                     /inference="alignment:Splign:2.1.0"
     exon            1650..2215
                     /gene="Odad4"
                     /gene_synonym="RGD1311859; Ttc25"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ccggaagtca gactatctct ctgggttgct aagagacccg gctgccacaa accaagccag
       61 tgattctcca gcttcttacc ctttctggat ctgcttcaaa atttccaaaa gcaggatgac
      121 catgtccgat ggcgaagctg ataacttgcg aagcaccttt ccctcttaca tggcagaggg
      181 cgagaggctt tatctgtgcg gggagttctc taaggcgatt caaagttttt ccaacgccct
      241 tcaccttcaa agcggggaca agaactgcct ggttgcccgc tccaagtgct acctgaagat
      301 gggagactta gagaagtcct tggaagatgc tgaggcctca cttcagaatg acccgacttt
      361 ctgcaagggg atcttacaga aggcagagac gctgtacacc atgggagact ttgagtttgc
      421 cctggtgttc taccatcgag gctacaaact gagacccgat cgggaattca aagttggaat
      481 tcagaaagcc caggaagcca tcaacaactc ggtgggaagc ccttcttcaa ttaagctgga
      541 gaacaaagga gacctctcct tcttaagcaa gcaagctgag agtaagaaag cccaacagaa
      601 gcatccacct gtgaagcacc tcctatccag caccaagcac gaaatcaagc ggaagggctc
      661 gctcaagagc gagaagacca tccggcagct gctcggggag ctgtacgtgg acaaggagta
      721 tctggagaag cttcttctgg atgaagatct catcaaaggc accatcaaga gtggcctgac
      781 tgtggaggaa ctcatcatga ctggaatcaa ctacctggac acccgcagca atttctggag
      841 gcagcagaaa cccatctacg ccagggagag agaccggaag ctgatgcaag agaaatggct
      901 gcgggaccgg aaacgcagcc cctcgcagac agcccactat atcctcaaga gcctagagga
      961 cattgacatg ttgttgacca gtggcagtgc tgaagggagc ctacaaaaag ctgagaaagt
     1021 acttaagaag gtcctggaat ggaaccaaga cgaggtaccc aacaaggatg aactggtcgg
     1081 gaacttgtac agctgcatag gcaacgccca gatcgagctg gggcagatgg tggctgccct
     1141 gcagagccac agaaaggacc tggagatcgc caaggaacat gacctcccag atgcaaaatc
     1201 gagagccctt gacaatattg gcagagtttt tgccagagtt gggaaattcc agcaagccat
     1261 tgacacgtgg gaggagaaga tccctctagc caaaaccacc ctggagaaga cctggctctt
     1321 ccatgagatt ggccgctgct acttggagct ggaccaggcg tggcaggccc agagttacgg
     1381 tgaaaagtct cagcagtatg ctgaggagga aggggacctc gagtggcagc tgaacgccag
     1441 tgttctggtg gcacaggccc aagtgaagct gagggacttc gagtcagctg tgaataactt
     1501 tgagaaggcc ctggagagag ccaagctggt ccacaacaat gaggcacagc aggctatcat
     1561 cagtgcctta gacgacgcca acaagggcat cattgaagaa cttaagaaaa cgaactacag
     1621 ggagatactc agggaaaagg cagagagaca ggacatcagt tcacagatgg agttttcggg
     1681 agcatcggag aaggaaacga gacgaggtcg agaagagcag gagagggtgg tgaagcagtg
     1741 ggagagggaa ctggagagtg agagagaggc cacggaagat gaagaggggt cgaagcagag
     1801 gctgctgagg gtggaggagc aagacggaag cagctcagga ctcacgagca gcaaaatgat
     1861 gttgggagac accccttcga caagccaaat gatgagaaga gagtccaggg aaatctaccg
     1921 aaggatctca gaggactcca cccaaccaac cctagatgat atcagccaaa accaggagaa
     1981 gccatcagaa acagccatgg aggagaggct ggagaaaaca gaagaggacg aatcgaaatc
     2041 ggaaactatt taacaactga ggaaaggctg agggctggct tagtgagctc gaggttcagg
     2101 cggccagtgt tcccaggtga gacgtctgga taggacgagc tgggagactg actcctacat
     2161 accatacccc atgtgcccct gctcccccat taaatatgcg tctttcattt ttata
//
