LOCUS       XM_039096478            4979 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus outer dynein arm docking complex
            subunit 2 (Odad2), transcript variant X4, mRNA.
ACCESSION   XM_039096478
VERSION     XM_039096478.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051352.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039096478.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4979
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4979
                     /gene="Odad2"
                     /note="outer dynein arm docking complex subunit 2; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 ESTs, 1 Protein, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 3 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:307036"
                     /db_xref="RGD:1306933"
     CDS             324..2516
                     /gene="Odad2"
                     /codon_start=1
                     /product="outer dynein arm-docking complex subunit 2
                     isoform X4"
                     /protein_id="XP_038952406.1"
                     /db_xref="GeneID:307036"
                     /db_xref="RGD:1306933"
                     /translation="MSKQEIRFNEEQQKDSQIFEKPKTEDGPSSATGSEKSKVEKLYF
                     GKSHMTKRLEPSLNWRATVDYKDHKSSTKDSQEEKQGKLEKSSTSVSTGRGQLLRKGG
                     EKVEETVSESSSESEEDEEPLDHRQEANADLPSEYWQIQKLVKYLKGGNQTATVIALC
                     SMRDFNLAQETCQLAIRDVGGLEVLINLLDTDEVKCKIGSLKILKEISHNPQIRRNIV
                     DLGGLPIMVNILDSSHKSLKCLAAETIANVAKFKRARRAVRQHGGITKLVALLDCGQN
                     SSEPAQPGLYETRDVEVARCGALALWSCSKSHSNKEAIRKAGGIPLLARLLKTSHENM
                     LIPVVGTLQECASEENYRAAIKAERIIENLVKNLNSENEQLQEHCAMAIYQCAEDEET
                     RDLVRLHGGLKPLASLLNNTDNKERLAAVTGAIWKCSISKENVIKFREYKAIETLVGL
                     LTDQPEEVLVNVVGALGECCQEYENRVLVRKCGGIQPLVNLLVGINQALLVNVTKAVG
                     ACAVEPESMAIIDRLDGVRLLWSLLKNPHPDVKASAAWALCPCIENAKDAGEMVRSFV
                     GGLELVVNLLKSDNKEVLASVCAAITNIAKDQENLAVITDHGVVPLLSKLANTNNDKL
                     RRHLAEAISRCCMWGRNRVAFGEHKAVAPLVRYLKSNDTNVHRATAQALYQLSEDADN
                     CITMHENGAVKLLLDMVGSPDQDLQEAAAGCISNIRRLALATEKARYN"
ORIGIN      
        1 ttgggccttt tgtgacttca tcagtaagct ccttgacgtc actgggtatt ttcatactaa
       61 aggagaactc ggacttcagt tgatagagag taaagttcca agccttgggc cttttgtgac
      121 ttcatcagta aggttcttga cgtcactggg tattttcata ctaaaggaga actcggactt
      181 cagttgatag agagtaaagt tctatatgca tagaggaggg aaaaacagaa gaggaggggg
      241 cgattgacta tgagagaaaa ggtgaagttt acaaggacat tgtgacatgt ttaaaggacc
      301 aatcaccagt attttcagag aatatgtcta agcaggagat tagatttaat gaggagcaac
      361 agaaggatag tcagattttt gagaaaccca agacagaaga tgggccctct tctgcaactg
      421 gctcagagaa aagtaaagtt gaaaagcttt actttgggaa aagtcatatg accaagagat
      481 tagagccaag cttaaactgg agagcaactg ttgattacaa agaccacaaa agctctacaa
      541 aggatagcca agaggaaaaa caaggaaaat tagaaaagtc atcgacatct gtttccacgg
      601 gtcgtgggca gttacttcgt aagggtggtg agaaggttga ggagaccgtc agtgagagct
      661 cctcagaaag tgaggaggat gaggagcctc tagaccaccg ccaggaagcc aatgcagacc
      721 tcccatcgga atactggcag attcagaagc tggtgaaata cttaaagggg ggaaatcaga
      781 cagcaactgt aattgccttg tgttccatga gggatttcaa cctcgctcaa gagacctgtc
      841 agctggcaat tagagatgtt ggaggtcttg aagtcttaat aaatctgctt gatacggatg
      901 aggtcaaatg caagattggt tcattaaaaa tcctgaagga aatcagtcat aatcctcaaa
      961 tcagacgtaa tattgttgac cttgggggcc taccaattat ggttaatata cttgattctt
     1021 cacacaagag tcttaagtgt ttggcagctg agacgatagc aaatgttgcc aagttcaaga
     1081 gagcccgtcg agcagtgaga cagcacggag gcattaccaa gctggttgct ctattggact
     1141 gtggacagaa ttcatcagaa ccagctcagc caggcctgta tgaaacgagg gacgtagaag
     1201 tggctcgatg cggggctttg gccctctgga gctgcagtaa gagtcactcg aacaaggaag
     1261 ccattcgtaa agctgggggc atccccttgt tggctcggct gctgaagacc tcgcatgaaa
     1321 acatgctcat cccagtggtg ggaacactgc aagaatgtgc atcagaggaa aactaccgag
     1381 ctgccatcaa ggcagagagg atcatagaga acctcgtgaa gaacttgaac agcgagaacg
     1441 agcagctgca ggagcattgt gccatggcca tctaccagtg tgctgaagat gaggaaaccc
     1501 gagacttggt tagactgcat ggaggcctta aacccctggc cagtctacta aataacacag
     1561 acaataaaga aagattagct gctgttactg gggcaatctg gaagtgctcc atcagcaaag
     1621 agaatgtgat taagtttcga gaatacaaag ccattgagac actggtggga cttttgactg
     1681 atcagcctga agaagtgctc gtgaatgtgg ttggggcctt gggagaatgc tgtcaagaat
     1741 atgaaaaccg ggtcctagtc cggaagtgtg gtggcatcca acctctcgtg aacctcctgg
     1801 ttggaataaa ccaagcactt cttgtgaatg tcacaaaagc tgttggtgca tgcgcagtag
     1861 aaccagaaag tatggcgata attgatcgct tagatggagt tcgcttattg tggtctctgc
     1921 tcaaaaaccc acacccagat gtgaaggcca gtgcagcgtg ggcgctctgt ccctgcattg
     1981 aaaatgcgaa ggatgctgga gaaatggttc gctcctttgt tggtggtctg gaacttgttg
     2041 tcaacctact gaagtcagac aataaagagg tcctggcaag tgtctgtgcc gctatcacca
     2101 acatagcaaa agaccaggag aacttagctg ttattacaga ccatggagtc gtccctcttt
     2161 tgtccaaact cgccaataca aataacgaca agctgagacg tcacctggca gaagctatct
     2221 cacgctgctg tatgtgggga aggaacagag tggctttcgg ggagcacaag gcagtggccc
     2281 cactggtgcg ttatctgaag tcaaatgaca ctaacgtgca tcgagctaca gcccaggcct
     2341 tgtaccagct ctcggaagat gccgataact gcatcaccat gcacgagaac ggtgctgtaa
     2401 agcttttact ggatatggtt gggtccccag accaggatct ccaggaagca gctgctggtt
     2461 gtatatccaa catccgaaga ctggctctcg ctacagagaa ggctagatac aattgaaatg
     2521 tgggcggaca caagctgcca aatgttctgt ccaaggatat accactccct tggccaggaa
     2581 gccagacttg agaagcattc atcaaccagt ccttcaatca gcctaaagaa aaaaaaatac
     2641 atggattaaa acacaaatac tttttgctga aaatctcaag aatcttatca ttctatttaa
     2701 tgaaaagtaa tgaaatgaca atgaaaatgt aatgaaatgt aaaaaccaat gaatttgtga
     2761 taattttcca aaaattgggg gtatatgtat gtgatatata tatatagtcc aactacacgt
     2821 ttgcatctgc cacgatttta ataaatacag ccgccccagt gtgcagttcc cgattcaccc
     2881 atgaatgtct cgagagcccc tttctgttaa acggatctgg ctgtcctgtg cttacagcct
     2941 ggtctgctcg atcgcttgca agccacagga gagttctgag gagatgtgct gacttcacag
     3001 atggttatga aatagaattc agcactaagc agctgccctt agcaagagca ttctgaggtc
     3061 accccagact tctcccatac catcaaacac ccgagacaat aatgcacaac tgtcaccaca
     3121 tggcggcatg cgaatcacaa ggacaaggag tcctttcact ttgggacaga cgagtgtaaa
     3181 cagcgatatg tttcatttcc ctcacggcca gtcaccaaca cttttattga aattaattta
     3241 tgctgatgta agggtaatat tatttcacat aaagttactc tgaatttctg aacttctttc
     3301 cagcacatga agtacttttt aaaaagtgtt tacaaaggat taatcacatt ttatcaggtt
     3361 aagaaacatt agaatgcact ttttaaagaa aaaaaaatca cataatgtaa cctcggtgtg
     3421 ctgaagtgtt tgggaactaa ctgtctcaac cttctaacgg tcgccagaaa aacagctttg
     3481 tttgcctcag ctcggagagc caaggatctc cctcagagaa cgctttagtg agcaggcaag
     3541 gccgttttat tgaaaaaata aaataggtac tatacatgtc atccttcggc gaaaaccata
     3601 aacttaattg aactcaatgt aaataattcg tacaaaacga aaagcctgcg cggataaatg
     3661 ttagaccaat aacagaggct ccagtttaaa aaaaaaaaag gtaagcgctt ctgagaattt
     3721 taaagcttca taaaaacact ttctttgctg ccttttggag gagactgtga gaagaatttg
     3781 aggaaggggg cagtgttaat tctaagaatt aattttaaag agtagagtac gtctgtcaac
     3841 ttccagcact atataattat ttctaaaggt cccgcgctgg ccacgttggt ttgacagcat
     3901 taaaaatggt aggttgtgtt agctacagga aatgaatggg cattagattg ttattagacg
     3961 gtccttgaaa gctcaccaat gacttcgggt cttaaaatat tctgtgtcac aaggtcctgg
     4021 aattaaggga aagaaagaag gaaaacagcc gtgaggggga cttgtgaata ctgaccgatg
     4081 ggaggattgc atctcacgat gctcttggtg tttctgctat tatggttaac aaatgcaaaa
     4141 taaaagcaac ggccattttc aaagaagctt tgcactcaga aacgggaaaa ggcagcataa
     4201 agactgtctt ctgtgtttcc taagtaaagg cttccactaa aatcactgca atatagtgcc
     4261 ttttagaata agatgttggt cttaaaggtc aatttccggc ttattttcag tgaaaggttt
     4321 tatagagatt gctgatctta ctagaaaaaa aaatgtcaaa tcctgcaaag caccctcagt
     4381 ttcagaggat gtgagtggga ccaatgacca ctccaacagt cagtgaatat acatcgtgag
     4441 aatacttata ttttttccct cctgtgtgag ggtttttgat atttattttg tgctagtgaa
     4501 ggttttaata ctttgtcatt ttgaagagtt tctttcttcg tctttatttt atctggatat
     4561 atggagagtg caatatgccc tctggctcct ttagtttgga aggtgtttaa ttggatttcc
     4621 tttgggaaac cctctctgat tgtcgtcccc cttgcagtca gaatttactg ctgtctgtca
     4681 ggatggctta cactaaaact aacttgtttc ttttgagtcc taaagatgaa ttgacagttc
     4741 tcttagggca tggctttgtg aattatgttt tctcctggac tggatgttac ttctgtatct
     4801 ctaaagcatt cacacagaac cgagagagag ggatttaaaa tccctgggaa atatattccc
     4861 acttaggaca ggaaggttat tgattgctaa tgcataggga ccaagagctg taagtaaagc
     4921 ctttctgttt tctttactta ttacattaga tcaacaagaa taaaactttc tggtccaaa
//
