LOCUS       XM_039096475            6229 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus outer dynein arm docking complex
            subunit 2 (Odad2), transcript variant X1, mRNA.
ACCESSION   XM_039096475
VERSION     XM_039096475.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051352.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039096475.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6229
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..6229
                     /gene="Odad2"
                     /note="outer dynein arm docking complex subunit 2; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 ESTs, 4 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 5 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:307036"
                     /db_xref="RGD:1306933"
     CDS             545..3766
                     /gene="Odad2"
                     /codon_start=1
                     /product="outer dynein arm-docking complex subunit 2
                     isoform X1"
                     /protein_id="XP_038952403.1"
                     /db_xref="GeneID:307036"
                     /db_xref="RGD:1306933"
                     /translation="MLSRGCSFLGSSGLIEKRSLHSLKLCALTLPQRINSSMGVALAR
                     SAQWTAAGYETGTLEITPLNESILNEITKFVESFSYKYPQEAKFVFVEPLEWKTYLEP
                     SAFESGYVVSSTTVESEEVDKDGQPLLLLSVPYIKVRSFGQLSQLLCVATDSKQQEAQ
                     ACIEANRDPVVKILGPDYDEMKEESTSLALLDTIIKDKELYIKRKVAILLKQLDLHLL
                     NHSLKHISLEISLNPGTFKKDIELLKRFSGKGEQTVLEWIEYTSDYEFSNGCRAPPWR
                     QIQGEMCYVMVKPHDVETLCLTCSTEGVFLNGGKTEEEGAIDYERKGEVYKDIVTCLK
                     DQSPVFSENMSKQEIRFNEEQQKDSQIFEKPKTEDGPSSATGSEKSKVEKLYFGKSHM
                     TKRLEPSLNWRATVDYKDHKSSTKDSQEEKQGKLEKSSTSVSTGRGQLLRKGGEKVEE
                     TVSESSSESEEDEEPLDHRQEANADLPSEYWQIQKLVKYLKGGNQTATVIALCSMRDF
                     NLAQETCQLAIRDVGGLEVLINLLDTDEVKCKIGSLKILKEISHNPQIRRNIVDLGGL
                     PIMVNILDSSHKSLKCLAAETIANVAKFKRARRAVRQHGGITKLVALLDCGQNSSEPA
                     QPGLYETRDVEVARCGALALWSCSKSHSNKEAIRKAGGIPLLARLLKTSHENMLIPVV
                     GTLQECASEENYRAAIKAERIIENLVKNLNSENEQLQEHCAMAIYQCAEDEETRDLVR
                     LHGGLKPLASLLNNTDNKERLAAVTGAIWKCSISKENVIKFREYKAIETLVGLLTDQP
                     EEVLVNVVGALGECCQEYENRVLVRKCGGIQPLVNLLVGINQALLVNVTKAVGACAVE
                     PESMAIIDRLDGVRLLWSLLKNPHPDVKASAAWALCPCIENAKDAGEMVRSFVGGLEL
                     VVNLLKSDNKEVLASVCAAITNIAKDQENLAVITDHGVVPLLSKLANTNNDKLRRHLA
                     EAISRCCMWGRNRVAFGEHKAVAPLVRYLKSNDTNVHRATAQALYQLSEDADNCITMH
                     ENGAVKLLLDMVGSPDQDLQEAAAGCISNIRRLALATEKARYN"
ORIGIN      
        1 caaacgaggt tttcatttca ctgacgtttc gctgcagaag gctgttgtgg agtatgttca
       61 gcctcgcgag tctgagttct actacagtta ctgaaagaat aaaaagctgc aagcctcaaa
      121 tatcctaaac gagacacgat gcaatttttg agggttttga tagattcaat acttaagtaa
      181 cgcctgtctg gaagcctgtg aaacatcaca ggatattcta atgcctcttt tctgagcgtg
      241 gtctcttcca ttttttgaag ccgctcccga tttcctagac tgagctggga tgagccctgg
      301 aactctgcag gcagcggagg aatcctagtg tttctagggt gtagggctgg ggatctgggg
      361 gttcggagca gcgacagggc tggcggctgg agtctcccag tgcttccttc ccatttgcag
      421 gcgtcaagcg cagccggtcg ggtgtttacc ggtgtcctag caacgaagcg cgcgcgggta
      481 ctagagtgcc aggcgacact gcaggattgt cccagcgtct gaggcactct gggggctcct
      541 gctaatgctc agtagaggct gctcatttct gggctcctca ggattgattg agaaaaggag
      601 tttacatagt cttaaactgt gtgctctgac cttgcctcag aggataaaca gctccatggg
      661 tgtggcgctg gccaggtcgg cacagtggac tgctgcaggg tatgagactg gaaccctgga
      721 aatcactcct ctgaatgagt cgatattgaa tgaaattact aagttcgtgg agtctttttc
      781 ttataaatat ccccaagagg caaaatttgt ttttgtagaa ccacttgagt ggaaaacata
      841 tttggaaccc tcagcatttg aatcgggcta tgttgtcagc tcgacaacag tggaatcaga
      901 agaggttgat aaagatggac agcccctgct gcttctctct gtaccttata ttaaagtcag
      961 gagctttggg caactgtcac agttgttatg cgtggccaca gacagcaagc agcaggaagc
     1021 acaggcctgt atcgaagcga acagagaccc cgtagtgaaa atcctgggtc cagattacga
     1081 tgagatgaag gaggagtcca cgagcttggc ccttctcgat acgatcatca aagataaaga
     1141 gctgtacatt aaaaggaaag tcgccatcct gctgaagcag ctggacctgc acctgctcaa
     1201 ccattccctg aagcacattt cgctggagat cagtttgaat ccagggactt ttaagaaaga
     1261 tattgagttg ctcaaacgtt tctcaggaaa aggggagcag acggtgctgg aatggatcga
     1321 atacacttca gattatgaat tttcaaatgg gtgtcgagcc ccaccatgga gacagattca
     1381 aggggaaatg tgttacgtga tggtgaagcc acacgacgtg gaaactctgt gcctcacctg
     1441 cagcacagaa ggggtgtttc taaatggtgg aaaaacagaa gaggaggggg cgattgacta
     1501 tgagagaaaa ggtgaagttt acaaggacat tgtgacatgt ttaaaggacc aatcaccagt
     1561 attttcagag aatatgtcta agcaggagat tagatttaat gaggagcaac agaaggatag
     1621 tcagattttt gagaaaccca agacagaaga tgggccctct tctgcaactg gctcagagaa
     1681 aagtaaagtt gaaaagcttt actttgggaa aagtcatatg accaagagat tagagccaag
     1741 cttaaactgg agagcaactg ttgattacaa agaccacaaa agctctacaa aggatagcca
     1801 agaggaaaaa caaggaaaat tagaaaagtc atcgacatct gtttccacgg gtcgtgggca
     1861 gttacttcgt aagggtggtg agaaggttga ggagaccgtc agtgagagct cctcagaaag
     1921 tgaggaggat gaggagcctc tagaccaccg ccaggaagcc aatgcagacc tcccatcgga
     1981 atactggcag attcagaagc tggtgaaata cttaaagggg ggaaatcaga cagcaactgt
     2041 aattgccttg tgttccatga gggatttcaa cctcgctcaa gagacctgtc agctggcaat
     2101 tagagatgtt ggaggtcttg aagtcttaat aaatctgctt gatacggatg aggtcaaatg
     2161 caagattggt tcattaaaaa tcctgaagga aatcagtcat aatcctcaaa tcagacgtaa
     2221 tattgttgac cttgggggcc taccaattat ggttaatata cttgattctt cacacaagag
     2281 tcttaagtgt ttggcagctg agacgatagc aaatgttgcc aagttcaaga gagcccgtcg
     2341 agcagtgaga cagcacggag gcattaccaa gctggttgct ctattggact gtggacagaa
     2401 ttcatcagaa ccagctcagc caggcctgta tgaaacgagg gacgtagaag tggctcgatg
     2461 cggggctttg gccctctgga gctgcagtaa gagtcactcg aacaaggaag ccattcgtaa
     2521 agctgggggc atccccttgt tggctcggct gctgaagacc tcgcatgaaa acatgctcat
     2581 cccagtggtg ggaacactgc aagaatgtgc atcagaggaa aactaccgag ctgccatcaa
     2641 ggcagagagg atcatagaga acctcgtgaa gaacttgaac agcgagaacg agcagctgca
     2701 ggagcattgt gccatggcca tctaccagtg tgctgaagat gaggaaaccc gagacttggt
     2761 tagactgcat ggaggcctta aacccctggc cagtctacta aataacacag acaataaaga
     2821 aagattagct gctgttactg gggcaatctg gaagtgctcc atcagcaaag agaatgtgat
     2881 taagtttcga gaatacaaag ccattgagac actggtggga cttttgactg atcagcctga
     2941 agaagtgctc gtgaatgtgg ttggggcctt gggagaatgc tgtcaagaat atgaaaaccg
     3001 ggtcctagtc cggaagtgtg gtggcatcca acctctcgtg aacctcctgg ttggaataaa
     3061 ccaagcactt cttgtgaatg tcacaaaagc tgttggtgca tgcgcagtag aaccagaaag
     3121 tatggcgata attgatcgct tagatggagt tcgcttattg tggtctctgc tcaaaaaccc
     3181 acacccagat gtgaaggcca gtgcagcgtg ggcgctctgt ccctgcattg aaaatgcgaa
     3241 ggatgctgga gaaatggttc gctcctttgt tggtggtctg gaacttgttg tcaacctact
     3301 gaagtcagac aataaagagg tcctggcaag tgtctgtgcc gctatcacca acatagcaaa
     3361 agaccaggag aacttagctg ttattacaga ccatggagtc gtccctcttt tgtccaaact
     3421 cgccaataca aataacgaca agctgagacg tcacctggca gaagctatct cacgctgctg
     3481 tatgtgggga aggaacagag tggctttcgg ggagcacaag gcagtggccc cactggtgcg
     3541 ttatctgaag tcaaatgaca ctaacgtgca tcgagctaca gcccaggcct tgtaccagct
     3601 ctcggaagat gccgataact gcatcaccat gcacgagaac ggtgctgtaa agcttttact
     3661 ggatatggtt gggtccccag accaggatct ccaggaagca gctgctggtt gtatatccaa
     3721 catccgaaga ctggctctcg ctacagagaa ggctagatac aattgaaatg tgggcggaca
     3781 caagctgcca aatgttctgt ccaaggatat accactccct tggccaggaa gccagacttg
     3841 agaagcattc atcaaccagt ccttcaatca gcctaaagaa aaaaaaatac atggattaaa
     3901 acacaaatac tttttgctga aaatctcaag aatcttatca ttctatttaa tgaaaagtaa
     3961 tgaaatgaca atgaaaatgt aatgaaatgt aaaaaccaat gaatttgtga taattttcca
     4021 aaaattgggg gtatatgtat gtgatatata tatatagtcc aactacacgt ttgcatctgc
     4081 cacgatttta ataaatacag ccgccccagt gtgcagttcc cgattcaccc atgaatgtct
     4141 cgagagcccc tttctgttaa acggatctgg ctgtcctgtg cttacagcct ggtctgctcg
     4201 atcgcttgca agccacagga gagttctgag gagatgtgct gacttcacag atggttatga
     4261 aatagaattc agcactaagc agctgccctt agcaagagca ttctgaggtc accccagact
     4321 tctcccatac catcaaacac ccgagacaat aatgcacaac tgtcaccaca tggcggcatg
     4381 cgaatcacaa ggacaaggag tcctttcact ttgggacaga cgagtgtaaa cagcgatatg
     4441 tttcatttcc ctcacggcca gtcaccaaca cttttattga aattaattta tgctgatgta
     4501 agggtaatat tatttcacat aaagttactc tgaatttctg aacttctttc cagcacatga
     4561 agtacttttt aaaaagtgtt tacaaaggat taatcacatt ttatcaggtt aagaaacatt
     4621 agaatgcact ttttaaagaa aaaaaaatca cataatgtaa cctcggtgtg ctgaagtgtt
     4681 tgggaactaa ctgtctcaac cttctaacgg tcgccagaaa aacagctttg tttgcctcag
     4741 ctcggagagc caaggatctc cctcagagaa cgctttagtg agcaggcaag gccgttttat
     4801 tgaaaaaata aaataggtac tatacatgtc atccttcggc gaaaaccata aacttaattg
     4861 aactcaatgt aaataattcg tacaaaacga aaagcctgcg cggataaatg ttagaccaat
     4921 aacagaggct ccagtttaaa aaaaaaaaag gtaagcgctt ctgagaattt taaagcttca
     4981 taaaaacact ttctttgctg ccttttggag gagactgtga gaagaatttg aggaaggggg
     5041 cagtgttaat tctaagaatt aattttaaag agtagagtac gtctgtcaac ttccagcact
     5101 atataattat ttctaaaggt cccgcgctgg ccacgttggt ttgacagcat taaaaatggt
     5161 aggttgtgtt agctacagga aatgaatggg cattagattg ttattagacg gtccttgaaa
     5221 gctcaccaat gacttcgggt cttaaaatat tctgtgtcac aaggtcctgg aattaaggga
     5281 aagaaagaag gaaaacagcc gtgaggggga cttgtgaata ctgaccgatg ggaggattgc
     5341 atctcacgat gctcttggtg tttctgctat tatggttaac aaatgcaaaa taaaagcaac
     5401 ggccattttc aaagaagctt tgcactcaga aacgggaaaa ggcagcataa agactgtctt
     5461 ctgtgtttcc taagtaaagg cttccactaa aatcactgca atatagtgcc ttttagaata
     5521 agatgttggt cttaaaggtc aatttccggc ttattttcag tgaaaggttt tatagagatt
     5581 gctgatctta ctagaaaaaa aaatgtcaaa tcctgcaaag caccctcagt ttcagaggat
     5641 gtgagtggga ccaatgacca ctccaacagt cagtgaatat acatcgtgag aatacttata
     5701 ttttttccct cctgtgtgag ggtttttgat atttattttg tgctagtgaa ggttttaata
     5761 ctttgtcatt ttgaagagtt tctttcttcg tctttatttt atctggatat atggagagtg
     5821 caatatgccc tctggctcct ttagtttgga aggtgtttaa ttggatttcc tttgggaaac
     5881 cctctctgat tgtcgtcccc cttgcagtca gaatttactg ctgtctgtca ggatggctta
     5941 cactaaaact aacttgtttc ttttgagtcc taaagatgaa ttgacagttc tcttagggca
     6001 tggctttgtg aattatgttt tctcctggac tggatgttac ttctgtatct ctaaagcatt
     6061 cacacagaac cgagagagag ggatttaaaa tccctgggaa atatattccc acttaggaca
     6121 ggaaggttat tgattgctaa tgcataggga ccaagagctg taagtaaagc ctttctgttt
     6181 tctttactta ttacattaga tcaacaagaa taaaactttc tggtccaaa
//
