LOCUS       XM_039112365            2205 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus outer dynein arm docking complex
            subunit 1 (Odad1), transcript variant X3, mRNA.
ACCESSION   XM_039112365
VERSION     XM_039112365.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039112365.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2205
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2205
                     /gene="Odad1"
                     /gene_synonym="Ccdc114; RGD1308141"
                     /note="outer dynein arm docking complex subunit 1; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 4 ESTs, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 5 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:308594"
                     /db_xref="RGD:1308141"
     CDS             304..1881
                     /gene="Odad1"
                     /gene_synonym="Ccdc114; RGD1308141"
                     /codon_start=1
                     /product="outer dynein arm-docking complex subunit 1
                     isoform X3"
                     /protein_id="XP_038968293.1"
                     /db_xref="GeneID:308594"
                     /db_xref="RGD:1308141"
                     /translation="MADVGGRQAWRRGQIKGEAEGCTWTSVVFEEIHLLQEMVGALST
                     SSTSAYTAREEAKTKMGMLQERAEKELAQSDTEAQILLRQISHLEQLHRFLKLKNHDR
                     QPDPGVVQKEEQRAWETSEGLRKTSQEKLVLRYEDTLNKLAQLTGESDPDLLVEKYLE
                     LEERNFAEFNFINEQNSELYHLQEEIKEMQEALVSEHASQDKQSLEREQQCKVLQQDV
                     EKVCSESERLEARFQVLRVQLEKIKTDIQVLFDKAQCDNSVIKDLLGVKTYMRDRDIG
                     LFLSTIEKRLVQLLTVQAFLEVQNNVPLADAALLALGQSIQEPPKKTTPLKPPDTMED
                     SSGVVIKDDYPMSKEELLSQVMKLVQLQDEEGSPKKRDSSPSLTLSSPRISLAAASVH
                     ARKASVVPESILSHKTGRGRGTGSISHVTFGDSASAPGPVTLASTSASGLPVSGRGSQ
                     GGRGAFKHTSSSSYLGSTGYLETSRGRESGTGGGHSQSMGSEMSRGFSSGSGQTSSAA
                     PASRPSSATSKDSRGYN"
ORIGIN      
        1 atcccattac agatggctgt gagccaccat gtggttgctg ggaattgaac tcaggaactc
       61 tggaagagca gtcagtgctc ttaactgctg aatcatctct ctttattgaa aatatgtagc
      121 tacttccaag gagctagaaa acagaacagc aggtcatggt atatgttact ctgtgaattt
      181 aacaaagtat cggaggtggg ggattttata gagaaaggag atcattgagc tcacagtggt
      241 ggaggtgaag aatccaaacc gcacaggact gctttgccta gggccttctt ggtccagcac
      301 atcatggcag atgtgggtgg aagacaggca tggaggagag gtcaaatcaa gggagaagca
      361 gagggctgca cctggacctc agtcgttttt gaggagatcc acctacttca ggagatggtt
      421 ggagctctca gcacatcctc tacttctgct tatactgcca gggaagaggc caagaccaag
      481 atgggcatgc tgcaggagcg tgcagagaag gagctggctc agagtgacac agaggcacag
      541 atcctactgc gacagatatc gcatctggag cagctgcacc gattcctcaa gctcaagaac
      601 catgaccgac agccggatcc cggtgtggtg caaaaggagg aacagcgagc atgggagacc
      661 tcagaaggac tcagaaagac ttcccaagag aagctagtgc tgcgttacga ggatactctg
      721 aacaaactgg cccagctgac cggcgagagc gacccggacc ttttggtgga gaaatacctg
      781 gagttggagg aacgcaactt tgctgagttt aacttcatca atgagcagaa ctcggaacta
      841 taccatcttc aggaggagat taaagagatg caggaagcct tagtcagcga gcatgccagt
      901 caggataagc agagcctgga gcgagagcag cagtgcaaag tgttgcagca ggatgtggaa
      961 aaagtgtgct ctgagtcgga gcggctggag gctcgcttcc aggttctccg agttcagctg
     1021 gaaaagatca agactgatat ccaggttctc ttcgacaagg ctcagtgtga caacagtgtc
     1081 atcaaggatc tccttggggt caagacctac atgcgggata gggacatagg tctcttcctg
     1141 agtaccattg agaagcggct ggtgcagctt ctcacggtgc aggccttcct tgaggtccag
     1201 aacaatgtcc ctttggctga tgctgcgctt ctggcactgg gtcagagcat acaggaaccc
     1261 ccaaagaaga ctaccccact caagcctcct gacaccatgg aggactcctc aggggttgta
     1321 atcaaagacg attaccctat gagcaaggag gaactgctga gtcaagtcat gaagttggtg
     1381 cagctccagg atgaggaggg gtctccaaag aagcgggaca gcagcccaag tttgactctt
     1441 tccagcccac gcatctcctt agcagctgcc tctgtgcacg ctagaaaggc cagcgtagtc
     1501 cctgagtcta tcctgagcca caagacaggc cgaggccgtg gcactggctc cataagccat
     1561 gtcacctttg gtgactctgc ttctgctcca ggccctgtga ccttggcttc caccagtgcc
     1621 agtggactac ctgtgtccgg ccggggctct cagggggggc gtggggcctt caaacacact
     1681 agctccagca gctacctggg gtctactggg tatctagaga ccagcagagg ccgcgagagc
     1741 gggacaggag gcggtcacag ccaaagcatg ggatccgaga tgagtagagg cttcagctcc
     1801 ggcagtggcc agacatccag tgctgccccc gcctccaggc ccagctctgc taccagcaag
     1861 gactcgaggg gctataacta gggttgcagg tccccttctg tctcaaccct tggcaggttt
     1921 tctaatttgt gccctgctct tccccagaga ctcctttcca atccctgtaa gcccaggcct
     1981 cttgagcttc cctccgtctc ttcccatctg ctcccatcgt taccctgcct tggccttgac
     2041 tctctgttgc cctcctcctc ctccttgctt cccgtctctg ccctcctcaa cctctccccg
     2101 aagcttccct tcatctgatg tctctgtctc ctaactggat ttccctccat tgacttaggt
     2161 gaaccgtgac aataggaaat aaaggtcaga gccccgtttt tccaa
//
