LOCUS       XM_039089113             965 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus oncomodulin (Ocm), transcript variant
            X2, mRNA.
ACCESSION   XM_039089113
VERSION     XM_039089113.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051347.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..965
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="12"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..965
                     /gene="Ocm"
                     /gene_synonym="Ocm2; OM"
                     /note="oncomodulin; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 EST, and 100% coverage
                     of the annotated genomic feature by RNAseq alignments,
                     including 3 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:25503"
                     /db_xref="RGD:3222"
     CDS             500..883
                     /gene="Ocm"
                     /gene_synonym="Ocm2; OM"
                     /codon_start=1
                     /product="oncomodulin isoform X2"
                     /protein_id="XP_038945041.1"
                     /db_xref="GeneID:25503"
                     /db_xref="RGD:3222"
                     /translation="MSITDILSAEDIAAALQECQDPDTFEPQKFFQTSGLSKMSASQV
                     KDIFRFIDNDQSGYLDGDELKIPGNGALLRPKSTEEREGKGQICLKVSKALGLGSSPT
                     SPELLYRVPRSPSAPCSLLRECNGL"
ORIGIN      
        1 gtgtggctca gtggtagagc ccctgcctag aatcccccag tgaggggctg ggtgcataaa
       61 ttagtgtgcg atggctactc ttggttgtta acttgactac aataggatta actaaaaccc
      121 caaaatgaag ggcacatctg tgagggagtt ttgcttaatt cgaagtagag aaagatctac
      181 ttttaatcca gatcttgatg agtgaagaca cttatagggg gtggtgctga ttccaaggtc
      241 ctgtccccta attggttctt gaccaatcaa taaaaatgcc aggggccaat tgctgggtgg
      301 aatgaaagag gcgggacttc cggctaagag acacagaaag agaaagggag attttgttat
      361 gcttcggagc gagaaaaggt gaccagccac gtgagatatc aggtggagcg accacggcca
      421 cctcccgagg caggagatta gaaatgcgac taaacaagaa actaagagaa gtttttggtt
      481 gctgaacaag gagaagaaaa tgagcatcac ggacatcctg agcgctgagg acattgcggc
      541 agccctgcag gaatgccaag acccagacac ctttgaacca caaaagttct tccagacatc
      601 gggcctctcc aagatgtctg ccagccaagt gaaggatatc ttccggttca tagacaacga
      661 ccagagtgga tacctggatg gagatgagct caaaattcca ggaaatggtg cactcttaag
      721 gcccaagtct acggaagaga gagaggggaa ggggcaaatc tgcctgaagg tttcaaaagc
      781 cctgggactg ggaagctccc caacctctcc cgaactactt taccgagtcc cccgaagccc
      841 ttctgcacca tgttccttgt tgagggaatg caatggtttg tgatggtggg taggtcctga
      901 taacctctgt aagcaccccc cccccggcag acaatgcctt taaaaaccac ccaataaaat
      961 cattt
//
