LOCUS       NM_001013874            1373 bp    mRNA    linear   ROD 20-SEP-2024
DEFINITION  Rattus norvegicus OCIA domain containing 1 (Ociad1), mRNA.
ACCESSION   NM_001013874 XM_214042
VERSION     NM_001013874.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1373)
  AUTHORS   Morgenstern,M., Peikert,C.D., Lubbert,P., Suppanz,I., Klemm,C.,
            Alka,O., Steiert,C., Naumenko,N., Schendzielorz,A., Melchionda,L.,
            Muhlhauser,W.W.D., Knapp,B., Busch,J.D., Stiller,S.B.,
            Dannenmaier,S., Lindau,C., Licheva,M., Eickhorst,C., Galbusera,R.,
            Zerbes,R.M., Ryan,M.T., Kraft,C., Kozjak-Pavlovic,V., Drepper,F.,
            Dennerlein,S., Oeljeklaus,S., Pfanner,N., Wiedemann,N. and
            Warscheid,B.
  TITLE     Quantitative high-confidence human mitochondrial proteome and its
            dynamics in cellular context
  JOURNAL   Cell Metab 33 (12), 2464-2483 (2021)
   PUBMED   34800366
REFERENCE   2  (bases 1 to 1373)
  AUTHORS   Sinha,A., Khadilkar,R.J., S,V.K., Roychowdhury Sinha,A. and
            Inamdar,M.S.
  TITLE     Conserved regulation of the Jak/STAT pathway by the endosomal
            protein asrij maintains stem cell potency
  JOURNAL   Cell Rep 4 (4), 649-658 (2013)
   PUBMED   23972987
REFERENCE   3  (bases 1 to 1373)
  AUTHORS   Ghosh,D., Lippert,D., Krokhin,O., Cortens,J.P. and Wilkins,J.A.
  TITLE     Defining the membrane proteome of NK cells
  JOURNAL   J Mass Spectrom 45 (1), 1-25 (2010)
   PUBMED   19946888
REFERENCE   4  (bases 1 to 1373)
  AUTHORS   Mukhopadhyay,A., Das,D. and Inamdar,M.S.
  TITLE     Embryonic stem cell and tissue-specific expression of a novel
            conserved gene, asrij
  JOURNAL   Dev Dyn 227 (4), 578-586 (2003)
   PUBMED   12889067
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC083718.1.
            
            On Apr 20, 2005 this sequence version replaced XM_214042.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC083718.1, FQ213030.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1373
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /map="14p11"
     gene            1..1373
                     /gene="Ociad1"
                     /note="OCIA domain containing 1"
                     /db_xref="GeneID:289590"
                     /db_xref="RGD:1359549"
     exon            1..156
                     /gene="Ociad1"
                     /inference="alignment:Splign:2.1.0"
     exon            157..219
                     /gene="Ociad1"
                     /inference="alignment:Splign:2.1.0"
     CDS             162..905
                     /gene="Ociad1"
                     /note="ovarian carcinoma immunoreactive antigen"
                     /codon_start=1
                     /product="OCIA domain-containing protein 1"
                     /protein_id="NP_001013896.1"
                     /db_xref="GeneID:289590"
                     /db_xref="RGD:1359549"
                     /translation="MNGRADFREPNAQVSRPIPDIGGGYIPTEEEWRLFAECHEECFW
                     FRSVPLAATSMLITQGLISKGILSSHPKYGSIPKLIFACIVGYFAGKLSYVKTCQEKF
                     KKLENSPLGEALRSGELRRSLPPGHYTQKPKYDSNVSGQSSFGTSPAADNIEKETLPR
                     YEPIPFSASMNESTPTGITDHIAQGPDPNLEDSPKRKSVTYEELRNKNRESYGVTLSH
                     KTDPSVRPMQERGPQKEVKVNKYGDTWDE"
     exon            220..300
                     /gene="Ociad1"
                     /inference="alignment:Splign:2.1.0"
     exon            301..354
                     /gene="Ociad1"
                     /inference="alignment:Splign:2.1.0"
     exon            355..402
                     /gene="Ociad1"
                     /inference="alignment:Splign:2.1.0"
     exon            403..538
                     /gene="Ociad1"
                     /inference="alignment:Splign:2.1.0"
     exon            539..714
                     /gene="Ociad1"
                     /inference="alignment:Splign:2.1.0"
     exon            715..867
                     /gene="Ociad1"
                     /inference="alignment:Splign:2.1.0"
     exon            868..1348
                     /gene="Ociad1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gctggcgctt gtgtctaggt gacatcttgg cgagcccttt gaagctgccc tctttcccct
       61 ccccgtttcc cgcgttgtcc tccgtgcctg tctttggggt cctctcctgg cctgtacccc
      121 gggtcttgct ccccgcgttg ccgcctcctt cgtgaggaac tatgaatggg agggcagatt
      181 ttcgggagcc gaatgcacaa gtgtcaagac caattcctga catagggggc ggctacattc
      241 caacagaaga agagtggagg ctctttgcag agtgccatga agagtgcttc tggttcagat
      301 ctgtgccgtt ggctgctaca agtatgttga ttactcaagg actaatcagt aaaggaatac
      361 tgtcaagtca tccaaaatat ggttccattc ctaaacttat atttgcttgt atcgtgggat
      421 actttgctgg aaagctttct tatgtgaaaa cttgccaaga aaagttcaag aagcttgaaa
      481 attctcccct tggagaagca ctgcggtcag gcgagttgcg gcgctctttg ccacctgggc
      541 actatactca aaagcctaaa tatgactcaa atgtgagtgg tcagtcctcc tttgggacat
      601 ctccagcagc agacaacata gaaaaggaga cgcttcctcg ttacgagcca attccattta
      661 gtgcttctat gaatgaatcc actcccactg gtattactga ccatattgcc caaggacctg
      721 atcccaacct tgaagacagt cccaaaagga aaagtgttac atatgaggag ttaaggaata
      781 agaacagaga gtcatatgga gtaaccctgt cacacaagac tgacccctca gtcaggccta
      841 tgcaggaaag agggccccaa aaagaagtca aagtaaacaa atatggagat acttgggacg
      901 agtgaaagac tccgccattg gacctactga aggccttcca tatccagctt catcaggtgg
      961 tcgtgtgtcc tacatgcttg gactcagcag cagatttcat aaatacattt aaaacgaaat
     1021 cctggtttgt gtgatttaac aatgctttac ggactcagat tttaatgttt actatggtgt
     1081 agatgtacca acctggtcgc cgagaatggt gatactctgc catagttgcg tgcactcggt
     1141 gaaattgttt ctgctacagg agacagactc atgaaactcg actgtgactc ttgatcagcc
     1201 catgtgacga tagctgcatg ctgaaggggg ggtgggggga gcgagcacat gcccagggtt
     1261 ccgcttcgca tcagttatta aaaggccttt ctccagcatt tactcgagca tcttagtgtc
     1321 tgtggtgaat aaagtgtaca cacagtgaaa aaaaaaaaaa aaaaaaaaaa aaa
//
