LOCUS       NM_001128139             728 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus odorant binding protein 2A (Obp2a), mRNA.
ACCESSION   NM_001128139 XM_001058733 XM_001077976
VERSION     NM_001128139.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 728)
  AUTHORS   Yao,G., Xie,S., Wan,X., Zhang,L., Liu,Q. and Hu,S.
  TITLE     Identification, characterization and expression analysis of rLcn13,
            an epididymal lipocalin in rats
  JOURNAL   Acta Biochim Biophys Sin (Shanghai) 55 (2), 314-321 (2023)
   PUBMED   36762499
  REMARK    GeneRIF: Identification, characterization and expression analysis
            of rLcn13, an epididymal lipocalin in rats.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000003.1.
            
            On Mar 15, 2021 this sequence version replaced NM_001128139.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: DQ537493.1, FM092450.1 [ECO:0000332]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-118               JAXUCZ010000003.1  28904083-28904200
            119-252             JAXUCZ010000003.1  28904727-28904860
            253-323             JAXUCZ010000003.1  28905106-28905176
            324-434             JAXUCZ010000003.1  28905549-28905659
            435-536             JAXUCZ010000003.1  28906214-28906315
            537-563             JAXUCZ010000003.1  28906784-28906810
            564-728             JAXUCZ010000003.1  28907225-28907389
FEATURES             Location/Qualifiers
     source          1..728
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3p13"
     gene            1..728
                     /gene="Obp2a"
                     /gene_synonym="Lcn13; Obp2b"
                     /note="odorant binding protein 2A"
                     /db_xref="GeneID:680754"
                     /db_xref="RGD:1588212"
     exon            1..118
                     /gene="Obp2a"
                     /gene_synonym="Lcn13; Obp2b"
                     /inference="alignment:Splign:2.1.0"
     CDS             32..562
                     /gene="Obp2a"
                     /gene_synonym="Lcn13; Obp2b"
                     /note="lipocalin 13; odorant binding protein 2B"
                     /codon_start=1
                     /product="odorant binding protein 2A precursor"
                     /protein_id="NP_001121611.1"
                     /db_xref="GeneID:680754"
                     /db_xref="RGD:1588212"
                     /translation="MKSLLLTVLLLELVAVLKAQELLLDDQEDYSGTWYPKAMVHNGS
                     LPHCKLPTRVFPVKVIALEDGDLEATVTVWKDDRCHEFKFVMRKTKEPGIYSTFHGKK
                     TVHVEKTSVEGHYIFYCEGLHNGKSFGMGKLMGRNPEENPEAMEEFKKFIQRMELQEE
                     NMFVPEIRDECVNESD"
     exon            119..252
                     /gene="Obp2a"
                     /gene_synonym="Lcn13; Obp2b"
                     /inference="alignment:Splign:2.1.0"
     exon            253..323
                     /gene="Obp2a"
                     /gene_synonym="Lcn13; Obp2b"
                     /inference="alignment:Splign:2.1.0"
     exon            324..434
                     /gene="Obp2a"
                     /gene_synonym="Lcn13; Obp2b"
                     /inference="alignment:Splign:2.1.0"
     exon            435..536
                     /gene="Obp2a"
                     /gene_synonym="Lcn13; Obp2b"
                     /inference="alignment:Splign:2.1.0"
     exon            537..563
                     /gene="Obp2a"
                     /gene_synonym="Lcn13; Obp2b"
                     /inference="alignment:Splign:2.1.0"
     exon            564..728
                     /gene="Obp2a"
                     /gene_synonym="Lcn13; Obp2b"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gctgccttgt gtgagagccc agtgactgga gatgaagagc ctgctcctta ccgtcctgct
       61 actggagctg gtggctgtcc taaaggctca ggaactccta ttagatgacc aggaggatta
      121 ctctgggacc tggtacccga aggcaatggt acacaatggg agcctacccc attgcaagct
      181 acccactagg gttttccctg tgaaagtgat agctctggaa gacggagact tggaggccac
      241 agttacagtc tggaaggatg atcggtgcca tgaatttaag tttgtgatga ggaaaacgaa
      301 agaacctggc atatacagta cctttcatgg caagaagact gttcatgtgg aaaagacatc
      361 agtggagggg cactacattt tctactgcga aggactgcac aacgggaagt cgtttgggat
      421 gggaaaactc atggggagaa accctgagga aaacccggag gctatggaag aatttaagaa
      481 attcatacag cgcatggaac tccaagagga aaacatgttt gtgccagaga tcagagatga
      541 gtgtgttaat gaaagtgact aggcagctac ccaggtttgc aacagctgag ccagccttgc
      601 tttcacacca ggctgggacg gacatcccgg caccacacct ctcctggacc aagcttccca
      661 ctgcctcgcc ccaaccccca tctcagtacc tgctcccctc cccaactcca aataaagctt
      721 tccagcag
//
