LOCUS       XM_039097259             981 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus oocyte specific homeobox 2 (Obox2),
            mRNA.
ACCESSION   XM_039097259
VERSION     XM_039097259.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 11% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..981
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..981
                     /gene="Obox2"
                     /note="oocyte specific homeobox 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:292574"
                     /db_xref="RGD:1307972"
     CDS             1..981
                     /gene="Obox2"
                     /codon_start=1
                     /product="homeobox protein ceh-37"
                     /protein_id="XP_038953187.1"
                     /db_xref="GeneID:292574"
                     /db_xref="RGD:1307972"
                     /translation="MEKYRNILLSVQNTDIAEGPSFYPKFQMSSYTPMDTSSQLPQEP
                     AWNLAFQMGQSPLVTSRTPMQSSPSVPEQNLNWQESQGSSRESKPMALSDKYGGKQTG
                     PVAPRKRRKERTQYSEKQKSVLQEHFAECQYPDKKLCLELASLIRVTEKEIKVWFKNN
                     RAKCKQKNVPEALPEKNGGSEAVSGSTDFPGSIAVVGGDQGEPMATAILDVDSTPKLN
                     CSQESSLDGNWTYDGAMCCLPEDLLDGNAPVTAGDFGESAPVEAQSDLAAAGAPVAMA
                     VDTQNPEECEDLPLLDEGVWQWMLEDFHQLEDWFTKNYIESPSSTSHPLD"
ORIGIN      
        1 atggagaagt acaggaacat actcctatca gttcagaaca cagatatcgc tgaaggtccc
       61 tcattttatc caaaattcca gatgtcttca tataccccca tggacaccag ttctcaattg
      121 cctcaagagc ctgcatggaa cttagctttt caaatgggcc agagtcccct tgtgacctca
      181 agaactccaa tgcaatcaag tccttcagtg cctgaacaga acctaaattg gcaagagtcc
      241 caagggtcat caagggaatc aaaacctatg gcactgtcag ataaatatgg cggtaaacaa
      301 actggccctg tggctccaag gaagcggcga aaggaacgca ctcagtactc tgaaaaacaa
      361 aagtccgtgc tgcaagaaca ttttgctgag tgccagtacc cagacaagaa actgtgtttg
      421 gagctggcat ccttgattcg tgtgacagag aaggagatca aggtctggtt caagaacaac
      481 cgggctaagt gcaaacagaa gaatgttcca gaagcactgc cagagaaaaa tggaggctct
      541 gaagctgttt ctgggtcaac cgattttcct ggttccatag ctgttgttgg tggtgaccag
      601 ggagagccca tggccacagc cattttggat gtggattcca ctcccaaact gaactgcagc
      661 caggagtctt ctctggatgg caattggacc tatgatggtg ccatgtgttg tctgccagaa
      721 gacttgcttg acggtaatgc ccctgttact gctggagact ttggtgaatc agcaccagtt
      781 gaagcccagt ctgaccttgc agcagctgga gctccagttg ccatggcagt tgacacccaa
      841 aacccagagg agtgtgagga tttacctcta ttggacgaag gggtctggca atggatgctt
      901 gaagactttc accaattgga agactggttt accaagaact acattgagag tcctagcagt
      961 acttctcacc cccttgacta g
//
