LOCUS       NM_001009490            1555 bp    mRNA    linear   ROD 29-MAR-2024
DEFINITION  Rattus norvegicus 2 ' -5 ' oligoadenylate synthetase 1F (Oas1f),
            mRNA.
ACCESSION   NM_001009490 XM_579291
VERSION     NM_001009490.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000012.1.
            
            On Nov 25, 2020 this sequence version replaced NM_001009490.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AY196700.1, SRR26643294.46649.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN06680422,
                                           SAMN06680428 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-212               JAXUCZ010000012.1  41366735-41366946   c
            213-489             JAXUCZ010000012.1  41365849-41366125   c
            490-686             JAXUCZ010000012.1  41362773-41362969   c
            687-919             JAXUCZ010000012.1  41359935-41360167   c
            920-1073            JAXUCZ010000012.1  41359132-41359285   c
            1074-1555           JAXUCZ010000012.1  41357647-41358128   c
FEATURES             Location/Qualifiers
     source          1..1555
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="12"
                     /map="12q16"
     gene            1..1555
                     /gene="Oas1f"
                     /note="2 ' -5 ' oligoadenylate synthetase 1F"
                     /db_xref="GeneID:494199"
                     /db_xref="RGD:1359647"
     exon            1..212
                     /gene="Oas1f"
                     /inference="alignment:Splign:2.1.0"
     CDS             33..1112
                     /gene="Oas1f"
                     /note="2'-5' oligoadenylate synthetase 1F"
                     /codon_start=1
                     /product="2 ' -5 ' oligoadenylate synthetase 1F"
                     /protein_id="NP_001009490.1"
                     /db_xref="GeneID:494199"
                     /db_xref="RGD:1359647"
                     /translation="MVNLSSTPACELDRFIKDHLPADTSFHAELRADIDFICAFLKER
                     CFQGAAHPVRVSRVVMGEHTMLKGRSEANLVVFLNDLPSFEDQLNLQGEFIEEIRKRL
                     CQLQQEKTLQVKLEVQSSEQPSSKSLSFTLSSPQLQQEVEFDVQPAYDVLFALRNNHK
                     PDPQIYTKTYAYLISVCTTLKKEGEFSTCFMELRQNFLKHREPKLKSLIRLVKHWYQL
                     CKEKLGKPLPPQYALELLTVYAWESGSRDCEFNTAQGFRTVLELVTKYQWLRIYWTLY
                     YDFRNKKVSDYLHKQLKKTRPVILDPADPTRNVAGSNPLCWRLLAKEAASWLQCPCFR
                     TCDMSLVHSWEVLTKVEFPQECVLL"
     exon            213..489
                     /gene="Oas1f"
                     /inference="alignment:Splign:2.1.0"
     exon            490..686
                     /gene="Oas1f"
                     /inference="alignment:Splign:2.1.0"
     exon            687..919
                     /gene="Oas1f"
                     /inference="alignment:Splign:2.1.0"
     exon            920..1073
                     /gene="Oas1f"
                     /inference="alignment:Splign:2.1.0"
     exon            1074..1555
                     /gene="Oas1f"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggctgcagtc agcaaacact cccggcctta aaatggtgaa cctcagcagc accccagcct
       61 gtgagctgga caggttcata aaggatcacc tccctgctga caccagcttc catgctgagc
      121 tcagagcaga cattgacttc atatgtgctt tcctgaagga gagatgcttc caaggtgccg
      181 ctcaccctgt gagggtctcc agggttgtga tgggcgaaca caccatgctt aagggtaggt
      241 cagaagccaa cctagtggtg ttccttaacg atctccccag ctttgaggat cagttgaatc
      301 tacagggaga gttcattgag gaaattcgga aacgactgtg tcagctgcag caagagaaaa
      361 cgttacaagt gaagcttgag gtccagagct cagagcagcc cagctccaag tctctgagct
      421 tcacgctgag ctcgccccag ctccagcagg aggtggagtt tgatgtgcag ccagcctatg
      481 atgtcctgtt tgccctaaga aacaaccaca agcccgaccc ccaaatctac accaaaacct
      541 acgcctacct catcagtgtg tgcaccactc tgaagaagga gggcgagttc tccacctgct
      601 tcatggagct ccggcaaaac ttcctgaagc atcgggaacc caagctgaag agcctcatcc
      661 gtctggtcaa gcactggtat caactgtgta aggagaagct ggggaagccg ctgcccccac
      721 agtacgccct ggagctgctc acggtctatg cctgggaaag tgggagtaga gactgtgaat
      781 tcaacacagc ccagggcttc cgaaccgtct tggaactggt caccaagtat cagtggcttc
      841 gaatctactg gacattgtat tatgacttta gaaacaagaa ggtctctgat tacctacaca
      901 aacagctcaa aaaaaccagg cctgtgatcc tggacccggc tgacccgaca agaaatgtgg
      961 ctggttcaaa ccccctctgc tggcgactgt tggcaaaaga agctgctagc tggctgcagt
     1021 gcccatgctt taggacctgt gatatgtccc tcgtgcactc ctgggaagtg ctgacaaagg
     1081 tcgagtttcc acaggaatgt gtccttctat gagcaccaaa gcacctgccc aggatgctca
     1141 agagtcaggg gcatgacctc tgctgcaggc ccttgaccta gagaggagag gaagctcccc
     1201 aaaaccccaa caagggaggg tccaacctgt gatcagactc tggtcttctg acccctgcct
     1261 tcctactcct gcatcctgtc ccatcacaga cagccctcct cacagcctgc ttcatctgcc
     1321 ttgtcctcca acagtgctct cttgggagac aagagattca gaaggggagg caggaactcg
     1381 agcttgactt ccacctgtcc acctgttggg agttctgtcc aatgtgtgac caacgacaat
     1441 aaaccatagc aagccatgag gatatgtgaa cattctgaag gatgtgtgtt ctcctccctc
     1501 tccctctccc cttccctccc tcccctctcc tccctcacct cccttttctt ccctc
//
