LOCUS       NM_001191731            1941 bp    mRNA    linear   ROD 28-MAR-2024
DEFINITION  Rattus norvegicus nuclear RNA export factor 3 (Nxf3), mRNA.
ACCESSION   NM_001191731 XM_228825
VERSION     NM_001191731.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1941)
  AUTHORS   Natalizio,B.J. and Wente,S.R.
  TITLE     Postage for the messenger: designating routes for nuclear mRNA
            export
  JOURNAL   Trends Cell Biol 23 (8), 365-373 (2013)
   PUBMED   23583578
  REMARK    Review article
REFERENCE   2  (bases 1 to 1941)
  AUTHORS   Sasaki,M., Takeda,E., Takano,K., Yomogida,K., Katahira,J. and
            Yoneda,Y.
  TITLE     Molecular cloning and functional characterization of mouse Nxf
            family gene products
  JOURNAL   Genomics 85 (5), 641-653 (2005)
   PUBMED   15820316
REFERENCE   3  (bases 1 to 1941)
  AUTHORS   Yang,J., Bogerd,H.P., Wang,P.J., Page,D.C. and Cullen,B.R.
  TITLE     Two closely related human nuclear export factors utilize entirely
            distinct export pathways
  JOURNAL   Mol Cell 8 (2), 397-406 (2001)
   PUBMED   11545741
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000021.1.
            
            On Apr 23, 2011 this sequence version replaced NM_001191731.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            RNAseq introns :: partial sample support SAMEA5760383, SAMEA5760389
                              [ECO:0000350]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on computational evidence
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-155               JAXUCZ010000021.1  103830718-103830872 c
            156-330             JAXUCZ010000021.1  103827094-103827268 c
            331-484             JAXUCZ010000021.1  103826754-103826907 c
            485-568             JAXUCZ010000021.1  103825462-103825545 c
            569-673             JAXUCZ010000021.1  103825250-103825354 c
            674-779             JAXUCZ010000021.1  103824880-103824985 c
            780-868             JAXUCZ010000021.1  103824651-103824739 c
            869-978             JAXUCZ010000021.1  103824072-103824181 c
            979-1015            JAXUCZ010000021.1  103822507-103822543 c
            1016-1084           JAXUCZ010000021.1  103821981-103822049 c
            1085-1140           JAXUCZ010000021.1  103821855-103821910 c
            1141-1248           JAXUCZ010000021.1  103821600-103821707 c
            1249-1307           JAXUCZ010000021.1  103821418-103821476 c
            1308-1423           JAXUCZ010000021.1  103821068-103821183 c
            1424-1466           JAXUCZ010000021.1  103820927-103820969 c
            1467-1536           JAXUCZ010000021.1  103820302-103820371 c
            1537-1710           JAXUCZ010000021.1  103819457-103819630 c
            1711-1771           JAXUCZ010000021.1  103818820-103818880 c
            1772-1941           JAXUCZ010000021.1  103818542-103818711 c
FEATURES             Location/Qualifiers
     source          1..1941
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /map="Xq32"
     gene            1..1941
                     /gene="Nxf3"
                     /gene_synonym="RGD1564923"
                     /note="nuclear RNA export factor 3"
                     /db_xref="GeneID:302591"
                     /db_xref="RGD:1564923"
     exon            1..155
                     /gene="Nxf3"
                     /gene_synonym="RGD1564923"
                     /inference="alignment:Splign:2.1.0"
     CDS             152..1825
                     /gene="Nxf3"
                     /gene_synonym="RGD1564923"
                     /codon_start=1
                     /product="nuclear RNA export factor 3"
                     /protein_id="NP_001178660.2"
                     /db_xref="GeneID:302591"
                     /db_xref="RGD:1564923"
                     /translation="MESRSETNPFRRRMRCRRIFRRRFLNSTEYISDTMRTSFYHQQD
                     EELAMSNAPMYTRRRYTPYGILSHHQRINLHKWDQMNVNMEEGAKPPERKMERDKQDD
                     TSENWFKVTIPFGIKYDKKWMLNLIQSQCSIPFTPVQFHYEKMQATFFVDDPNIAFML
                     KAISDKIRDETDNKPQSHITPSVILQLTMNQQCDTSQRILNRQRLSFDQDLTTYPTDL
                     VLSPRRYMTPSLNISEEDVTQANSEGKMAKEQASDIEEICAVKSSLSTTMPDKSSNIN
                     SILELFPKLLSLDGQESCKPALCGPEDQKTISTYKRSFFESESIKTLVLQFLQQYYFI
                     YDNGDREGLLNAYHADACFSLTVPFSTMDLSASSVCEYVKYSRSMKVLKDPYMRKQLL
                     KHKKCDIIHFLRALPKTQHDLTSFSVDICFQTEKTLCFSVSGLFKEVEGSSQGCFHAF
                     TRIFVATWDNSDLCIINDKLSVRNVYGFPSASNAVDTCSSSRLPSLSQDQQQMMPTFC
                     SQSGVNVERSQKCLHDDQWNYNKAIQSFALLKVKDTVPEDKTTHTSPRS"
     exon            156..330
                     /gene="Nxf3"
                     /gene_synonym="RGD1564923"
                     /inference="alignment:Splign:2.1.0"
     exon            331..484
                     /gene="Nxf3"
                     /gene_synonym="RGD1564923"
                     /inference="alignment:Splign:2.1.0"
     exon            485..568
                     /gene="Nxf3"
                     /gene_synonym="RGD1564923"
                     /inference="alignment:Splign:2.1.0"
     exon            569..673
                     /gene="Nxf3"
                     /gene_synonym="RGD1564923"
                     /inference="alignment:Splign:2.1.0"
     exon            674..779
                     /gene="Nxf3"
                     /gene_synonym="RGD1564923"
                     /inference="alignment:Splign:2.1.0"
     exon            780..868
                     /gene="Nxf3"
                     /gene_synonym="RGD1564923"
                     /inference="alignment:Splign:2.1.0"
     exon            869..978
                     /gene="Nxf3"
                     /gene_synonym="RGD1564923"
                     /inference="alignment:Splign:2.1.0"
     exon            979..1015
                     /gene="Nxf3"
                     /gene_synonym="RGD1564923"
                     /inference="alignment:Splign:2.1.0"
     exon            1016..1084
                     /gene="Nxf3"
                     /gene_synonym="RGD1564923"
                     /inference="alignment:Splign:2.1.0"
     exon            1085..1140
                     /gene="Nxf3"
                     /gene_synonym="RGD1564923"
                     /inference="alignment:Splign:2.1.0"
     exon            1141..1248
                     /gene="Nxf3"
                     /gene_synonym="RGD1564923"
                     /inference="alignment:Splign:2.1.0"
     exon            1249..1307
                     /gene="Nxf3"
                     /gene_synonym="RGD1564923"
                     /inference="alignment:Splign:2.1.0"
     exon            1308..1423
                     /gene="Nxf3"
                     /gene_synonym="RGD1564923"
                     /inference="alignment:Splign:2.1.0"
     exon            1424..1466
                     /gene="Nxf3"
                     /gene_synonym="RGD1564923"
                     /inference="alignment:Splign:2.1.0"
     exon            1467..1536
                     /gene="Nxf3"
                     /gene_synonym="RGD1564923"
                     /inference="alignment:Splign:2.1.0"
     exon            1537..1710
                     /gene="Nxf3"
                     /gene_synonym="RGD1564923"
                     /inference="alignment:Splign:2.1.0"
     exon            1711..1771
                     /gene="Nxf3"
                     /gene_synonym="RGD1564923"
                     /inference="alignment:Splign:2.1.0"
     exon            1772..1941
                     /gene="Nxf3"
                     /gene_synonym="RGD1564923"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gggatgaaac ttccggaaag ggtttccatc ttgtaacggt tgtttgaagc ctgctgtctt
       61 ctttctcagc agctctcttc agtttttcag ctctagacca cacagaagaa cacaataaga
      121 acatttgtga caaggtactt caggacctac catggagtcc aggtctgaaa ctaacccctt
      181 ccgaagaaga atgagatgcc gacgtatttt ccgacggaga tttctcaact cgactgagta
      241 catcagtgac acgatgcgta cttcatttta tcaccagcaa gatgaagagc tagcaatgag
      301 taatgctccc atgtatactc gaagaagata cactccatat ggcattctgt cccatcatca
      361 aagaatcaat ttacataaat gggaccaaat gaatgttaat atggaggagg gcgcaaaacc
      421 tccagagaga aaaatggaga gagacaaaca agatgacact tcagagaact ggttcaaggt
      481 cacaattccc tttggcataa aatatgataa gaagtggatg ctgaatttga ttcagagcca
      541 gtgcagcatc cctttcactc cagttcagtt tcactatgaa aaaatgcagg ccactttttt
      601 tgttgatgat cccaacattg cctttatgct gaaggctatc agtgacaaga ttcgagatga
      661 gactgataat aagcctcaga gtcacataac tccatctgta attctgcagc tgactatgaa
      721 ccaacagtgt gatacttctc agcgcattct taataggcag agactctcct ttgaccaaga
      781 tttgacgacc tatcctactg acttggtact gagtcctaga aggtatatga ctccttcctt
      841 gaatatctct gaagaggacg tgacccaggc aaactctgaa ggaaagatgg ccaaggaaca
      901 agcctcagac atagaagaga tatgtgcagt caaaagctct ctgagtacta ccatgccgga
      961 taagtccagt aacataaatt caattctgga attgtttccc aagttactaa gcctggatgg
     1021 acaggagtca tgtaaaccag ctctctgtgg ccctgaagat caaaagacca tatcaacgta
     1081 caagagaagt ttttttgaat ctgagtccat aaagacactg gtcctacagt tcctgcagca
     1141 atattacttc atctatgaca atggagatcg ggagggactc ctcaatgctt accacgctga
     1201 tgcttgcttc tcattgaccg tccctttcag taccatggac ttatccgcga gcagcgtgtg
     1261 tgagtacgtc aagtatagca gaagtatgaa ggttctcaag gatccttata tgcggaagca
     1321 gctgctaaag cacaagaaat gtgacattat tcacttcctt cgtgcattgc ccaaaactca
     1381 acatgacttg acctccttct cggtggacat atgtttccaa acagaaaaaa ctctctgctt
     1441 ctctgttagt gggttgttca aggaagtgga gggcagctct caagggtgtt ttcatgcctt
     1501 cactcggatc ttcgttgcta cctgggacaa ttcagacctt tgtatcatca atgacaagct
     1561 gtctgtgagg aatgtctatg ggtttcccag tgcctccaac gctgtggaca catgctcctc
     1621 cagccgtttg ccttccctct ctcaagatca acagcagatg atgccaacat tctgttccca
     1681 gtctggcgtg aatgttgaga ggtctcaaaa atgccttcat gatgaccagt ggaattacaa
     1741 caaagccata caaagctttg ctttgctcaa ggtaaaggac acggtcccag aggacaagac
     1801 cacccataca agtccaagat cctaagaaca acacaccaag aagaaattcc tgagagtcac
     1861 catcttattt ctatttattt atatcaaaaa tccctgctag actatggagg agtagtgtaa
     1921 atttccatgt aaacaaactg g
//
