LOCUS       NM_001108957            3688 bp    mRNA    linear   ROD 21-MAR-2023
DEFINITION  Rattus norvegicus NUT midline carcinoma, family member 1 (Nutm1),
            mRNA.
ACCESSION   NM_001108957 XM_001080485 XM_345415
VERSION     NM_001108957.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473949.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_345415.3, XM_001080485.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA5760383,
                              SAMEA5760434 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3688
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q35"
     gene            1..3688
                     /gene="Nutm1"
                     /gene_synonym="Nut; RGD1564529"
                     /note="NUT midline carcinoma, family member 1"
                     /db_xref="GeneID:366153"
                     /db_xref="RGD:1564529"
     exon            1..126
                     /gene="Nutm1"
                     /gene_synonym="Nut; RGD1564529"
                     /inference="alignment:Splign:2.1.0"
     CDS             111..3467
                     /gene="Nutm1"
                     /gene_synonym="Nut; RGD1564529"
                     /note="protein NUT; nuclear protein in testis"
                     /codon_start=1
                     /product="NUT family member 1"
                     /protein_id="NP_001102427.1"
                     /db_xref="GeneID:366153"
                     /db_xref="RGD:1564529"
                     /translation="MASDGSSPLPGPDMAMKPGTGLSPFSTLPFAPPPPIPPDQSLWE
                     PSPQPPIPPVFSPGNPLLLSAFPSPLLVTGEGGPGPSVAGTGQVIVKVKTDVGPAESS
                     QTQNLIVTQTALNWIHSGAPCGSQEGPPPRYVTASNVKTILPAVAVGVSQEGPAGLPL
                     QVLPPAAQLAPIVPLEKPWPGTQATTMEGGPVAVRKPSQGDLAYASKGVYENYRRWQR
                     YKVLARTHLSQSPDAEALSCFLIPVLRSLARLKPTMTLEEGLPRALQEWERTSNFDRM
                     IFYEMAEKFMEFEAEEETQIQNAQLMNGSPGLSPIAPLKLDPPGPMVPESCQQPVYIP
                     KKAASKTRAPRRRQRKPQRPPVPEAPKEIPPEAVQEYIDIMDGLMGNNVDTGKTEEEE
                     GQQEDAGMYPDPSLLSYIDELCSQEVFVSKVEAVIHPQFLADLLSPEEQRDPLALIEE
                     LEQEEGLTLAQLVQKRLLALEEEDAQAPPSCSGAQSDSSPSVSDEDEDGGQRRRPSPG
                     LQGAAGIVRIGKSASPGKQAREMHGGQEQTLGGPRGVHKDGNSLPSPSSWDLQLEHTA
                     SQGMQVPLGMERKGSGKAIKQLPATQDGHPGGTGSSGHYPVADRNPEVIPFCWQEDLQ
                     HVRASNLDVGHIEPVPLQGLGLEKQALVLQIGQQIGGAGMLTKGREQPSVVPQKGSSR
                     AMWGDDRGPDVVQSYGQNHSPGAAGNLDVVSLTPGLWLSSDMEAVGLEFPLQIENVTE
                     SIRDEAFKREDQAPGSRNSASPGTRKNKVPKDVGKSMIPCGGTDKTTVPEMRKSCSLP
                     GPLMASGPGLRSKEKQERSPEATQNPSDLWAEACSPLLQTPDPSTLGSSKDTLVPTCQ
                     GTLLIVGTQDASSFPEASQKADSRGNLLFPLLENIEQVKLLDVRNDSGPQPGVCKDSC
                     SSNFNSFNPQGECREDTVSSKPTDLVPLQGNRESYTHETTKSTSGQGQGRTSPRWGTR
                     EALVLREIPVRETCTSADTAKGSETEKEEDEELSNFSYLLASKLNLSSGGLPLSTRHA
                     PRGQGIVRTSRHSAEVDDLGQPSPPPKSGKQALVGSPAPVVERPGQGAQLNSGQKPLA
                     LGVAQLPQPRNKRRRDGFVTSKRKKRRRSQ"
     exon            127..832
                     /gene="Nutm1"
                     /gene_synonym="Nut; RGD1564529"
                     /inference="alignment:Splign:2.1.0"
     exon            833..961
                     /gene="Nutm1"
                     /gene_synonym="Nut; RGD1564529"
                     /inference="alignment:Splign:2.1.0"
     exon            962..1101
                     /gene="Nutm1"
                     /gene_synonym="Nut; RGD1564529"
                     /inference="alignment:Splign:2.1.0"
     exon            1102..1376
                     /gene="Nutm1"
                     /gene_synonym="Nut; RGD1564529"
                     /inference="alignment:Splign:2.1.0"
     exon            1377..1493
                     /gene="Nutm1"
                     /gene_synonym="Nut; RGD1564529"
                     /inference="alignment:Splign:2.1.0"
     exon            1494..3688
                     /gene="Nutm1"
                     /gene_synonym="Nut; RGD1564529"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ttccttggat atcatctgtt ggagctaggt cattgcctgg atcctggacc caactgtttc
       61 atcctggagc catccagacc gccactgttg gtgtacctaa accctgggtt atggcatcag
      121 atggatcctc tccattacca ggaccagata tggccatgaa acctggtact ggcctgtccc
      181 ctttcagtac acttcccttt gccccacctc ctcccattcc accagaccaa tccctctggg
      241 agccatcacc acagccccct ataccgcctg tcttctctcc aggcaatcct ctgctccttt
      301 ctgctttccc cagcccattg ttggtgacag gagaaggagg ccctggcccc agtgtggctg
      361 gaactggcca ggtcattgtc aaagtcaaga cagatgtggg gccagctgag tcctctcaaa
      421 ctcagaacct tatagttact cagacggccc taaactggat tcactcaggt gctccctgtg
      481 ggagccagga ggggcctcct cctcgatatg tgacagcctc taatgtgaag accatcctgc
      541 ctgccgtggc tgttggagtg agccaggagg gccctgcagg acttcccctg caggtactac
      601 caccagctgc ccagctggct cccattgtgc ccctggaaaa gccctggcca ggaacacaag
      661 caacaaccat ggaaggaggt cctgtggctg ttcggaagcc ctctcaaggt gatcttgcct
      721 atgcttccaa gggcgtttat gagaactatc gtcgctggca gcgctacaaa gtcttggccc
      781 ggactcacct atcccagagt cctgatgcag aagctctttc ctgctttctt atcccagtgc
      841 ttcgttccct ggcccggctg aagcctacta tgaccttgga ggagggactg ccgagggctc
      901 tgcaggaatg ggagcgtacc agcaactttg accggatgat cttttatgag atggcagaga
      961 agttcatgga gtttgaggct gaggaggaaa cacagataca gaatgcacag ttgatgaatg
     1021 gctccccggg tctgtcccct atagctcctt tgaaacttga tcctccaggg cccatggtcc
     1081 ctgagtcttg ccagcagcca gtgtacattc caaagaaggc agcctctaag acacgggctc
     1141 cccgtcggcg gcaacgcaaa ccccaaaggc ctccagttcc tgaggcaccc aaagagatcc
     1201 cacctgaagc cgtgcaagaa tatattgaca tcatggacgg gttgatgggg aacaatgtgg
     1261 acactgggaa gacagaggag gaagaggggc agcaggaaga tgcagggatg tatcccgatc
     1321 caagtcttct gagctacatt gatgaactat gttctcagga ggtctttgtc tccaaggtgg
     1381 aggcggtcat tcaccctcaa tttctggcag atctgctgtc cccagaagag cagagagatc
     1441 ctttggcttt aattgaggag ctagagcaag aagaaggact tactcttgcc cagctggtcc
     1501 aaaaacgact cctggccctg gaggaggaag acgcacaggc gcctccgagt tgcagcggag
     1561 ctcagtcaga ctcgagtcct tctgtttctg atgaggatga agatgggggt caaaggcgtc
     1621 gaccctcgcc tgggcttcag ggggctgcgg gtattgttcg cattggaaaa tctgcttctc
     1681 caggcaagca ggcaagggaa atgcatggtg ggcaggaaca aacactaggt ggtccaaggg
     1741 gggttcacaa ggatggaaat agtctgccat cccctagcag ctgggacctg cagctagagc
     1801 acacagcttc ccagggaatg caagtaccct tgggtatgga gagaaaaggc tctgggaagg
     1861 ctataaaaca gctacctgca actcaggatg gccacccagg aggtacaggg tcatctgggc
     1921 actacccagt agcagacagg aatccagagg ttataccttt ttgttggcaa gaggatctcc
     1981 aacacgtgag agcctccaat ttggatgttg gacatataga gccagttcct ctgcagggac
     2041 ttgggttaga aaaacaggct ttggtgttgc agataggaca gcagattggg ggagctggga
     2101 tgcttactaa aggaagagaa caaccttcag tggttcccca gaagggctct tcaagagcca
     2161 tgtggggaga tgacagaggt cctgatgtgg ttcagagtta cggtcagaac cattcccctg
     2221 gagcagctgg caacctagac gtggtttctc tcaccccagg actgtggctg agcagtgaca
     2281 tggaggctgt aggcttagag tttcccttac aaatcgaaaa tgttacagaa agcatccggg
     2341 atgaagcatt taaaagggag gaccaggccc caggttctag aaacagtgcc tctccaggta
     2401 ctaggaaaaa caaagtgccc aaggatgtgg gaaagagcat gattccctgt ggaggcacag
     2461 ataaaacaac tgtcccagaa atgagaaagt cctgcagctt gccgggacct ttgatggcca
     2521 gtggtccagg tttgaggtcc aaagaaaagc aagagcggag ccctgaagcc acacagaatc
     2581 ccagtgacct gtgggctgag gcttgctccc cactgctgca aacacctgac ccttccacac
     2641 tggggtcctc caaagacacc ctggtaccca cgtgccaagg cactcttctc attgttggga
     2701 cccaggatgc ctcctctttc cccgaggcta gccaaaaggc agacagcagg ggtaatctac
     2761 tttttcctct gttggaaaac atagaacagg tcaaattact agatgttaga aatgacagtg
     2821 gcccccaacc aggggtctgc aaggactcct gctcatcaaa ttttaattct tttaaccccc
     2881 aaggagagtg cagggaagac actgtttcct ccaaacccac tgaccttgtt cctttacaag
     2941 gcaaccggga gtcttataca catgagacaa ccaaatcgac atctggccag ggccagggca
     3001 gaacttcccc aaggtgggga accagggagg ctttggttct gagagaaatc cctgttagag
     3061 aaacatgcac ctcagccgat acagccaaag gaagtgagac agagaaggag gaagatgaag
     3121 aactctccaa cttctcctac cttttggctt caaaacttaa cctctcttca ggagggcttc
     3181 cccttagtac tcgtcatgcc cctagaggtc agggaatcgt gagaacatcc cgccattctg
     3241 ctgaagtaga tgacctcggc cagccttcac cccctcccaa gtctgggaag caagctctag
     3301 ttgggagtcc agctcctgtt gtagagagac cagggcaagg agctcagctt aattctgggc
     3361 agaaacccct tgctctggga gtggcacagc tcccacagcc tcgtaataaa aggcggcgtg
     3421 acggttttgt caccagcaaa aggaagaaac gacgtcgtag ccagtaggaa gcaaagggcc
     3481 accctgctcc atctagcagc acccaaaggt gggtgtccca gagtctgttt tactgctgct
     3541 gctcccccag tggaaaagca acctcagccc agtgctgctt ttgttgttgt gctagaagtt
     3601 ggaaagcctg gggcaggtca gcctggctat gaaggcaaag tttggctttg ggaagctaaa
     3661 tggaaaaata aagattgttt tttgttgg
//
