LOCUS       NM_001399531            2097 bp    mRNA    linear   ROD 27-MAR-2024
DEFINITION  Rattus norvegicus nucleolar and spindle associated protein 1
            (Nusap1), transcript variant 1, mRNA.
ACCESSION   NM_001399531 XM_006234768
VERSION     NM_001399531.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2097)
  AUTHORS   Castello,A., Fischer,B., Eichelbaum,K., Horos,R., Beckmann,B.M.,
            Strein,C., Davey,N.E., Humphreys,D.T., Preiss,T., Steinmetz,L.M.,
            Krijgsveld,J. and Hentze,M.W.
  TITLE     Insights into RNA biology from an atlas of mammalian mRNA-binding
            proteins
  JOURNAL   Cell 149 (6), 1393-1406 (2012)
   PUBMED   22658674
REFERENCE   2  (bases 1 to 2097)
  AUTHORS   Raemaekers,T., Ribbeck,K., Beaudouin,J., Annaert,W., Van Camp,M.,
            Stockmans,I., Smets,N., Bouillon,R., Ellenberg,J. and Carmeliet,G.
  TITLE     NuSAP, a novel microtubule-associated protein involved in mitotic
            spindle organization
  JOURNAL   J Cell Biol 162 (6), 1017-1029 (2003)
   PUBMED   12963707
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000003.1.
            
            On Jan 10, 2022 this sequence version replaced XM_006234768.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC161947.1, SRR26643285.12788.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-167               JAXUCZ010000003.1  127057295-127057461
            168-236             JAXUCZ010000003.1  127062034-127062102
            237-383             JAXUCZ010000003.1  127066116-127066262
            384-531             JAXUCZ010000003.1  127068936-127069083
            532-621             JAXUCZ010000003.1  127072702-127072791
            622-731             JAXUCZ010000003.1  127074218-127074327
            732-844             JAXUCZ010000003.1  127077900-127078012
            845-1002            JAXUCZ010000003.1  127078927-127079084
            1003-1119           JAXUCZ010000003.1  127081909-127082025
            1120-1228           JAXUCZ010000003.1  127084909-127085017
            1229-2097           JAXUCZ010000003.1  127086369-127087237
FEATURES             Location/Qualifiers
     source          1..2097
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q35"
     gene            1..2097
                     /gene="Nusap1"
                     /note="nucleolar and spindle associated protein 1"
                     /db_xref="GeneID:311336"
                     /db_xref="RGD:1305764"
     exon            1..167
                     /gene="Nusap1"
                     /inference="alignment:Splign:2.1.0"
     CDS             75..1325
                     /gene="Nusap1"
                     /note="isoform 1 is encoded by transcript variant 1"
                     /codon_start=1
                     /product="nucleolar and spindle-associated protein 1
                     isoform 1"
                     /protein_id="NP_001386460.1"
                     /db_xref="GeneID:311336"
                     /db_xref="RGD:1305764"
                     /translation="MTVPSAEELDSFKYSDLQNLAKRLGLRANLRADKLLRALKAHLN
                     PETRRENKNQDENQSSAFSYDETETQVTSEEQAETESGSHVTRTRRRKRKTIHGIPTS
                     QDHMEMKRRDSTTFQNQENQDLRATEKVPSLPEQRPEDGNAASSEEGKINDKKGPLEK
                     RSLCTDGFSKLGNSKRISATTPNFKRLHEAHFKKMESIDEYMVRKKKHFKEHDSLNEL
                     KQLDKKVTPVPPRGRLSVLCTPARQRCSQGHSATKMNVRFSAATKDNEHKCSLTKTPA
                     RKSPHVTAPGSASKGQAVLKTPKLKTTERNSTAVITPFKLMTEATQTPGSSKKPIFDL
                     KASLSRPLNYKPHKGKLKPWGQAKENNSLNECVSRVTLHRKTYKQPPLQTREEQRKRH
                     VQERKERKEKLLEARRNLGVTKAQ"
     exon            168..236
                     /gene="Nusap1"
                     /inference="alignment:Splign:2.1.0"
     exon            237..383
                     /gene="Nusap1"
                     /inference="alignment:Splign:2.1.0"
     exon            384..531
                     /gene="Nusap1"
                     /inference="alignment:Splign:2.1.0"
     exon            532..621
                     /gene="Nusap1"
                     /inference="alignment:Splign:2.1.0"
     exon            622..731
                     /gene="Nusap1"
                     /inference="alignment:Splign:2.1.0"
     exon            732..844
                     /gene="Nusap1"
                     /inference="alignment:Splign:2.1.0"
     exon            845..1002
                     /gene="Nusap1"
                     /inference="alignment:Splign:2.1.0"
     exon            1003..1119
                     /gene="Nusap1"
                     /inference="alignment:Splign:2.1.0"
     exon            1120..1228
                     /gene="Nusap1"
                     /inference="alignment:Splign:2.1.0"
     exon            1229..2097
                     /gene="Nusap1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggcgccagtt ttgaacggtg ctgttttgag tcgtgtggct gtttttctgg gtatcaccgt
       61 gattgcagaa cgtgatgacc gtcccctctg cagaggagct ggactccttc aagtacagcg
      121 acctgcaaaa tttagccaaa agactgggcc tccgggctaa cctgagggca gacaagttgt
      181 taagagcctt gaaagcacac ctgaatccag aaacaagaag agaaaataaa aatcaggatg
      241 aaaatcagtc ttctgcattc tcctacgatg agactgagac acaagtcacc agtgaggagc
      301 aggctgagac ggaatcaggt agtcatgtca ccagaaccag gaggaggaag cgcaagacca
      361 tccatggaat tcctacctcc caggatcata tggagatgaa aagaagagac agcactacat
      421 tccaaaatca ggaaaatcaa gacctcagag ctactgaaaa ggttccttct ctgccagagc
      481 aaaggccaga agatgggaat gcagcttcct cagaagaagg aaaaataaac gacaaaaagg
      541 ggcctttgga aaaaagatct ctgtgcacgg atgggttttc taaacttggg aatagtaaaa
      601 gaatttcagc cactacacca aactttaaga ggcttcatga ggctcatttt aagaaaatgg
      661 aatccattga tgaatatatg gtgagaaaaa agaaacactt taaagagcac gattcactta
      721 atgaactaaa gcagcttgac aaaaaagtga ccccagttcc accaagaggg agactctctg
      781 tactctgcac tcctgcgagg cagcggtgct cacagggcca ctcagcaact aaaatgaatg
      841 tcaggttctc agctgctact aaagataatg aacataagtg ctcgctgacc aagacaccag
      901 ccagaaagtc cccacatgtg actgcacctg ggagtgcttc aaagggccag gctgtgctca
      961 agacaccaaa gttaaagacc actgagagga attccactgc agttattact ccattcaagt
     1021 tgatgactga agcaacacag actccaggtt ctagtaagaa accgatattt gatctcaaag
     1081 caagcttgtc tcgtcccctc aactacaagc cacacaaagg aaagctgaaa ccttggggcc
     1141 aagctaaaga gaataattct ctgaatgaat gtgtgagcag agttaccctg cacaggaaaa
     1201 cttacaaaca acctcctctc cagaccaggg aagaacaacg gaagagacat gtgcaagaac
     1261 ggaaggagag aaaagaaaag cttttggaag ctcgaagaaa cttgggtgtg actaaagccc
     1321 agtgaccctg ctgtcccttt cctcctcatt ctcctttgta tgtttttata ctttctctac
     1381 ttcaatcaaa agctcttttc tgtcataact tgtatagtgc ctcctctgtg ctatatctga
     1441 gaatacatta tcaccttaaa gtccataact gaagtgactt tcacttaatg tcctgtacaa
     1501 ctccaacttt taaagacctg tccttgtgat cttaagagct tttcatgtca aggccctgct
     1561 agtcccgatg gcgatgacct gcatcctttt ctgcacaaga gtcccctgag cggcaagctg
     1621 aggcagaagc tcagtgtgag agagtaagat gacgctccca ggagagggag gctgggaggc
     1681 cacatttttg ttcagtagcc tggaaaatct attagtctta ttgaaattat attttatttt
     1741 gataggtaaa aagttttagc ttataagagc cttgttctga catttcaggt atttgccaac
     1801 tgtcactcat tataatccta aactagaaaa cctctacgct ctcttaaata gaagccacag
     1861 ggcaaagggt gtgcctcagt tgtacagcac tcagctatca cacacctgcc cctgaatttg
     1921 actcctggtc ccaccaaaaa caaaaccgag aatggctgcc gtaagaaaac ctccttggca
     1981 gacttagacc tcacagtagg agagggagct gaccttctga ccttgctcgg ccctgtagag
     2041 actctgagtt gtgtgtaatg attacaatgt tcataaataa aaattttcac tgtgata
//
